RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CNTN4Q8IWV2 1026 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 ST13P4Q8IZP2 240 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 ZCCHC7Q8N3Z6 543 aaKnown RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 RTL3Q8N8U3 475 aaKnown RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 GLB1L3Q8NCI6 653 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 CLRN3Q8NCR9 226 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 ZNF680Q8NEM1 530 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 TRPV1Q8NER1 839 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 OR10H5Q8NGA6 315 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 KCNG4Q8TDN1 519 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 BRI3BPQ8WY22 251 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 RFKQ969G6 155 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 EGLN2Q96KS0 407 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 USP28Q96RU2 1077 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 RAD9AQ99638 391 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 SHCBP1LQ9BZQ2 653 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 ENKD1Q9H0I2 346 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 C17orf75Q9HAS0 396 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 EMC7Q9NPA0 242 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 EIF2B3Q9NR50 452 aaKnown RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 SIRT3Q9NTG7 399 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 SPTLC3Q9NUV7 552 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 TMOD2Q9NZR1 351 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 MORF4L1Q9UBU8 362 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 ASIC3Q9UHC3 531 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 BAIAP2L1Q9UHR4 511 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 TSPYL4Q9UJ04 414 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 ITGA11Q9UKX5 1188 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 NUDCQ9Y266 331 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 NOC2LQ9Y3T9 749 aaKnown RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 CCL27Q9Y4X3 112 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 FAM169AQ9Y6X4 670 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 METP08581 1390 aa5.77□□□□□ -1.49
LRCH3-212ENST00000466845 AHDC1Q5TGY3 1603 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-212ENST00000466845 SPATA31A3Q5VYP0 1347 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PTCH1Q13635 1447 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 ASXL1Q8IXJ9 1541 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 A0A1W2PRV1 198 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 POM121BA6NF01 834 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 MFSD2BA6NFX1 497 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 AHRRA9YTQ3 701 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CLDN3O15551 220 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 HOXA3O43365 443 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 SUV39H1O43463 412 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 VEGFDO43915 354 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 GCATO75600 419 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 TSPAN9O75954 239 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 LY86O95711 162 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 FTCDO95954 541 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PENKP01210 267 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 IL1AP01583 271 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 A1BGP04217 495 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 TUBB4AP04350 444 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 FYNP06241 537 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 STAG3L3P0CL85 134 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CCDC192P0DO97 292 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CLUP10909 449 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CYP19A1P11511 503 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PRPS2P11908 318 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 JUPP14923 745 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PRKACAP17612 351 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CPN2P22792 545 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 U2AF2P26368 475 aaKnown RBP eCLIP5.76□□□□□ -1.492e-13■■■■□ 19.3
LRCH3-212ENST00000466845 RPA1P27694 616 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PCSK1P29120 753 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PCGF2P35227 344 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 ETV5P41161 510 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PTGER3P43115 390 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 GPR3P46089 330 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CRKLP46109 303 aaKnown RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PIP4K2AP48426 406 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 GATMP50440 423 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 RABGGTBP53611 331 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PSMC6P62333 389 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CYP4F2P78329 520 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 S100A12P80511 92 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PMP22Q01453 160 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 SMARCB1Q12824 385 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 EPS8Q12929 822 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 IL24Q13007 206 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 E2F2Q14209 437 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 LPIN1Q14693 890 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CNN3Q15417 329 aaKnown RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 RGS21Q2M5E4 152 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 TYSND1Q2T9J0 566 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 C19orf54Q5BKX5 351 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 GLRA4Q5JXX5 417 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CACHD1Q5VU97 1274 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 RRAGBQ5VZM2 374 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 SLC30A9Q6PML9 568 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 PTF1AQ7RTS3 328 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 OTOAQ7RTW8 1153 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 SLC51BQ86UW2 128 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 KBTBD6Q86V97 674 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 FJX1Q86VR8 437 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CXorf67Q86X51 503 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-212ENST00000466845 METTL23Q86XA0 190 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 C2CD5Q86YS7 1000 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 CAMK1DQ8IU85 385 aa5.76□□□□□ -1.49
LRCH3-212ENST00000466845 SCML4Q8N228 414 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms