RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 CPP00450 1065 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PRB1P04280 392 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 RPLP0P05388 317 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 RARAP10276 462 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 TCF4P15884 667 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 VIPR1P32241 457 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PBX1P40424 430 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 INHBCP55103 352 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 CDH6P55285 790 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 SLC25A11Q02978 314 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 VAC14Q08AM6 782 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 HLTFQ14527 1009 aaKnown RBP eCLIP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 ACOX1Q15067 660 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 CNGA3Q16281 694 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 TAF8Q7Z7C8 310 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 B3GNT8Q7Z7M8 397 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 LRRC49Q8IUZ0 686 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PELI3Q8N2H9 469 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PGBD5Q8N414 524 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PAF1Q8N7H5 531 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 NUS1Q96E22 293 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 DTD2Q96FN9 168 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 LGR4Q9BXB1 951 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 TEX101Q9BY14 249 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 STRADBQ9C0K7 418 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 TMEM168Q9H0V1 697 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 SYNDIG1Q9H7V2 258 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 CPNE5Q9HCH3 593 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PCDH18Q9HCL0 1135 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 RCOR3Q9P2K3 495 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PHTF1Q9UMS5 762 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 SCN8AQ9UQD0 1980 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 COL6A6A6NMZ7 2263 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 PRSS38A1L453 326 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 K7ENP7 123 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 NUDT21O43809 227 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 SERPINC1P01008 464 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 UGT1A5P35504 534 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 ZFP36L1Q07352 338 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 TRAF2Q12933 501 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 TCEA2Q15560 299 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 C14orf28Q4W4Y0 310 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 TDRD12Q587J7 1177 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 ARHGAP40Q5TG30 622 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 TXNRD3NBQ6F5E7 133 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 INO80CQ6PI98 192 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 RAB11FIP2Q7L804 512 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 C17orf82Q86X59 251 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 CCNJLQ8IV13 435 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 ATPAF2Q8N5M1 289 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 TEX26Q8N6G2 289 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 FAM46DQ8NEK8 389 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 GPBAR1Q8TDU6 330 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 NSMCE1Q8WV22 266 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 HSPH1Q92598 858 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 SCRN2Q96FV2 425 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 CYP4F12Q9HCS2 524 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
SOX2-OT-203ENST00000466034 ZNF462Q96JM2 2506 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 TTC24A2A3L6 582 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 A8MX80 341 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 PGLSO95336 258 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 SERPING1P05155 500 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 CYP1A2P05177 515 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 CEACAM5P06731 702 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 CCNB1P14635 433 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 LHCGRP22888 699 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 IL4RP24394 825 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 MMP13P45452 471 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 CFHR1Q03591 330 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 DPTQ07507 201 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 CLN3Q13286 438 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 NR1D2Q14995 579 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 MARC1Q5VT66 337 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 SPECC1LQ69YQ0 1117 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 ALG1LQ6GMV1 187 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 FOXR1Q6PIV2 292 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 NRROSQ86YC3 692 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 ZNF843Q8N446 348 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 KIAA1524Q8TCG1 905 aa12.46□□□□□ -0.41
SOX2-OT-203ENST00000466034 TTC9Q92623 222 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms