RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 ZNF713Q8N859 430 aaPredicted RBP3.17□□□□□ -1.9
CD55-207ENST00000465534 KIAA1524Q8TCG1 905 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 MAGEC3Q8TD91 643 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 JPH3Q8WXH2 748 aaPredicted RBP3.17□□□□□ -1.9
CD55-207ENST00000465534 CTHRC1Q96CG8 243 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 MRPL38Q96DV4 380 aaKnown RBP3.17□□□□□ -1.9
CD55-207ENST00000465534 MTMR8Q96EF0 704 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 CFAP36Q96G28 342 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 HIC2Q96JB3 615 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 PARD6BQ9BYG5 372 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 MYLK2Q9H1R3 596 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 TTC12Q9H892 705 aaPredicted RBP3.17□□□□□ -1.9
CD55-207ENST00000465534 CLK4Q9HAZ1 481 aaKnown RBP3.17□□□□□ -1.9
CD55-207ENST00000465534 PARVGQ9HBI0 331 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 GPR108Q9NPR9 543 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 SH3GLB2Q9NR46 395 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 TYW1Q9NV66 732 aaKnown RBP3.17□□□□□ -1.9
CD55-207ENST00000465534 MYO6Q9UM54 1294 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 TRAF3IP3Q9Y228 551 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 NUDCQ9Y266 331 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 CNPY2Q9Y2B0 182 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 MED16Q9Y2X0 877 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 PDZD2O15018 2839 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 HIVEP1P15822 2718 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 PTPRCP08575 1304 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 TLN2Q9Y4G6 2542 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 CSPG4Q6UVK1 2322 aa3.17□□□□□ -1.9
CD55-207ENST00000465534 COL4A1P02462 1669 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 ERICH2A1L162 156 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 SMTNL1A8MU46 457 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 RASA4BC9J798 803 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 MCF2LO15068 1137 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 NMT2O60551 498 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 TSPAN1O60635 241 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 SNX2O60749 519 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 KCNJ13O60928 360 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 STAMBPO95630 424 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 PENKP01210 267 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 GLULP15104 373 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 PRLRP16471 622 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 FERP16591 822 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 ATP5DP30049 168 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 ARRB2P32121 409 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 HSPA4P34932 840 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 UBA7P41226 1012 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 HALP42357 657 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 GUCY2FP51841 1108 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 RRP1P56182 461 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 GEMIN4P57678 1058 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 RPL36AP83881 106 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 INAQ16352 499 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 TCEAL5Q5H9L2 206 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 WDR45BQ5MNZ6 344 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 ODR4Q5SWX8 454 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 BEND6Q5SZJ8 279 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 SPATA1Q5VX52 437 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 SLC30A9Q6PML9 568 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 NCCRP1Q6ZVX7 275 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 FAM57BQ71RH2 274 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 RTL10Q7L3V2 364 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 NANOGNBQ7Z5D8 188 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 IQCA1Q86XH1 822 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 SPATA2LQ8IUW3 424 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 LRRC43Q8N309 656 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 CELF5Q8N6W0 485 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 C12orf76Q8N812 135 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 SPERTQ8NA61 448 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 TRIM58Q8NG06 486 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 NEK11Q8NG66 645 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 EXOC6Q8TAG9 804 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 NEUROG1Q92886 237 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 SDCCAG3Q96C92 435 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 HVCN1Q96D96 273 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 GIMAP5Q96F15 307 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 TRMT61AQ96FX7 289 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 RBM14Q96PK6 669 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 JPH2Q9BR39 696 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 TUBB6Q9BUF5 446 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 HERC2P3Q9BVR0 1158 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 CCDC8Q9H0W5 538 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 DBNDD1Q9H9R9 158 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 AASDHPPTQ9NRN7 309 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 HELLSQ9NRZ9 838 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 PDRG1Q9NUG6 133 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 ARL8BQ9NVJ2 186 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 IL1RAPL1Q9NZN1 696 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 EPS15L1Q9UBC2 864 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 DDX20Q9UHI6 824 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 FBXO2Q9UK22 296 aaPredicted RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 FBXL5Q9UKA1 691 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 MRPL11Q9Y3B7 192 aaKnown RBP3.16□□□□□ -1.9
CD55-207ENST00000465534 PCDHB2Q9Y5E7 798 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 CSMD1Q96PZ7 3565 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 PSME4Q14997 1843 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 A0A087WV48 116 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 TMEM272A0A1B0GTI8 110 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 TMEM247A6NEH6 219 aa3.16□□□□□ -1.9
CD55-207ENST00000465534 C2CD4BA6NLJ0 364 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms