RNA–Protein interactions for RNA: ENST00000464048.1

DENND4B-204, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-204ENST00000464048 EPHX1P07099 455 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 RETP07949 1114 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SNRPAP09012 282 aaKnown RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 TPH1P17752 444 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 OXTRP30559 389 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 HOXD12P35452 270 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SLC18A1P54219 525 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 DMWDQ09019 674 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 ILF2Q12905 390 aaKnown RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 DNAJC3Q13217 504 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 ELAVL3Q14576 367 aaKnown RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 POU6F1Q14863 301 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SKIDA1Q1XH10 827 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 FNDC3BQ53EP0 1204 aaKnown RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SIRPB2Q5JXA9 342 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 LINGO4Q6UY18 593 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SRLQ86TD4 932 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 CYP4X1Q8N118 509 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SLC25A41Q8N5S1 370 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 MRGPRX3Q96LB0 322 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 FCRL3Q96P31 734 aaPredicted RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 TRIB3Q96RU7 358 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SMC6Q96SB8 1091 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 CPNE1Q99829 537 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 SELENOSQ9BQE4 189 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 ADGRE3Q9BY15 652 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 USP36Q9P275 1121 aaKnown RBP13.28□□□□□ -0.28
DENND4B-204ENST00000464048 TXNDC16Q9P2K2 825 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 GMEB2Q9UKD1 530 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 ERVW-1Q9UQF0 538 aa13.28□□□□□ -0.28
DENND4B-204ENST00000464048 CXorf49A8MYA2 514 aaPredicted RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 SOCS5O75159 536 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 GSRP00390 522 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 BRAFP15056 766 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 NDUFV2P19404 249 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 GP5P40197 560 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 CHRNA4P43681 627 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 RGRP47804 291 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 COPAP53621 1224 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 RPL26P61254 145 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 SNRPD1P62314 119 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 CEP68Q76N32 757 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 KCNMB4Q86W47 210 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 SRRM1Q8IYB3 904 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 PCDH20Q8N6Y1 951 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 MZB1Q8WU39 189 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 HMGB4Q8WW32 186 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 MFSD3Q96ES6 412 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 TRIM56Q9BRZ2 755 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 FAM167BQ9BTA0 163 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 RSPH9Q9H1X1 276 aaPredicted RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 TRABDQ9H4I3 376 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 CHRAC1Q9NRG0 131 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 SMYD2Q9NRG4 433 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 TREX1Q9NSU2 369 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 RPL26L1Q9UNX3 145 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 FCF1Q9Y324 198 aaKnown RBP13.27□□□□□ -0.29
DENND4B-204ENST00000464048 RAI2Q9Y5P3 530 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 ACTL7AQ9Y615 435 aa13.27□□□□□ -0.29
DENND4B-204ENST00000464048 SRRM3A6NNA2 597 aaPredicted RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 PRPF4O43172 522 aaKnown RBP eCLIP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 RNASEH1O60930 286 aaKnown RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 EPN2O95208 641 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 MT-ND3P03897 115 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 NMBRP28336 390 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 MDH1P40925 334 aaKnown RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 ATP1A2P50993 1020 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 GYS2P54840 703 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 CSE1LP55060 971 aaKnown RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 MSLNQ13421 630 aaPredicted RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 SEPT6Q14141 434 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 IHHQ14623 411 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 GRM3Q14832 879 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 UGP2Q16851 508 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 PLK5Q496M5 336 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 TTC31Q49AM3 519 aaPredicted RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 TSTD2Q5T7W7 516 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 GRTP1Q5TC63 336 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 ZNF776Q68DI1 518 aaPredicted RBP13.26□□□□□ -0.29
DENND4B-204ENST00000464048 KIAA1211LQ6NV74 962 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 PACS1Q6VY07 963 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 TIFABQ6ZNK6 161 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 USP30Q70CQ3 517 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 ASCL5Q7RTU5 278 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 DSG4Q86SJ6 1040 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 KBTBD6Q86V97 674 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 CNTN4Q8IWV2 1026 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 LMNTD2Q8IXW0 634 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 CALML6Q8TD86 181 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 BRSK1Q8TDC3 778 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 SORCS1Q8WY21 1168 aa13.26□□□□□ -0.29
DENND4B-204ENST00000464048 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms