RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 RASGRP1O95267 797 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 TOP3BO95985 862 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 TNFP01375 233 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 APOC2P02655 101 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 ZNF30P17039 623 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 ETV3P41162 512 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 SKOR1P84550 965 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 SHC2P98077 582 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 DNAJC3Q13217 504 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 ZNF211Q13398 564 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 PRKD1Q15139 912 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 PTPRRQ15256 657 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 PCSK7Q16549 785 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 PRRT3Q5FWE3 981 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 CRTC1Q6UUV9 634 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 Q6ZVL8 140 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 KANSL1Q7Z3B3 1105 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 HSD11B1LQ7Z5J1 315 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 TSPAN33Q86UF1 283 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 ZNF548Q8NEK5 533 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 OR4C6Q8NH72 309 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 TSACCQ96A04 125 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 WDR92Q96MX6 357 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 MCCC1Q96RQ3 725 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 KLQ9UEF7 1012 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 EFR3BQ9Y2G0 817 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 ADGRG1Q9Y653 693 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 CSNK1G3Q9Y6M4 447 aa18.09■□□□□ 0.49
PDLIM2-215ENST00000456545 DNAH14Q0VDD8 3507 aa18.08■□□□□ 0.49
PDLIM2-215ENST00000456545 A0A0U1RQJ8 604 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 GOLGA6L9A6NEM1 432 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 ANKRD66B4E2M5 251 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 FTCDO95954 541 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 ANXA6P08133 673 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 MMP2P08253 660 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 TSHRP16473 764 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 CKMT2P17540 419 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 LHCGRP22888 699 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 PTPN3P26045 913 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 SRP54P61011 504 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 XRCC4Q13426 336 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 C1orf61Q13536 156 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 FAM182AQ5T1J6 154 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 LRRC66Q68CR7 880 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 RAET1GQ6H3X3 334 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 ESRP1Q6NXG1 681 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 RBFAQ8N0V3 343 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 CCHCR1Q8TD31 782 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 HTR3CQ8WXA8 447 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 DTD2Q96FN9 168 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 IMP4Q96G21 291 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 TEKT5Q96M29 485 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 VAT1Q99536 393 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 WDR26Q9H7D7 661 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 PHPT1Q9NRX4 125 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 NLGN3Q9NZ94 848 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 KLF15Q9UIH9 416 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 CACNA1AO00555 2505 aa18.08■□□□□ 0.48
PDLIM2-215ENST00000456545 C1orf232A0A0U1RR37 186 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 GOLGA6L3A6NEY3 463 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 CAPN8A6NHC0 703 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 TRIM38O00635 465 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 PMPCBO75439 489 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 STK10O94804 968 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 CLDN7O95471 211 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 C1SP09871 688 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 PYGMP11217 842 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 CDK4P11802 303 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 GPR1P46091 355 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 DUSP3P51452 185 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 CDK18Q07002 472 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 GALNT3Q14435 633 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 IHHQ14623 411 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 ELOCQ15369 112 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 DARS2Q6PI48 645 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 RAB44Q7Z6P3 723 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 LRRC8AQ8IWT6 810 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 SCG3Q8WXD2 468 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 GLMNQ92990 594 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 FUBP1Q96AE4 644 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 SMIM14Q96QK8 99 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 GRPEL1Q9HAV7 217 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 CD84Q9UIB8 345 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 PACSIN2Q9UNF0 486 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 PCDHGA1Q9Y5H4 931 aa18.07■□□□□ 0.48
PDLIM2-215ENST00000456545 A0A0U1RQS6 177 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 K7ESM1 405 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 RFPL3O75679 317 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 PRLP01236 227 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 HOXC4P09017 264 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 CCDC175P0C221 793 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 GM2AP17900 193 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 PTPN7P35236 360 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 HK3P52790 923 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 KIAA1024LP59773 190 aa18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 EIF3EP60228 445 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 OTUD4Q01804 1114 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-215ENST00000456545 PTSQ03393 145 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms