RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 DNALI1O14645 258 aaPredicted RBP12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 RABGGTBP53611 331 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 CBFBQ13951 182 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 UNC5AQ6ZN44 842 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 STK32CQ86UX6 486 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 RASGEF1AQ8N9B8 481 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 HEPHQ9BQS7 1158 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 SLC24A3Q9HC58 644 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 SYNPO2Q9UMS6 1093 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 PXDNQ92626 1479 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 INPPL1O15357 1258 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 LAMTOR5O43504 91 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 RARAP10276 462 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 CCNA2P20248 432 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 MAGEA9P43362 315 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 PRKAA2P54646 552 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 PTPN20Q4JDL3 420 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 EARS2Q5JPH6 523 aaKnown RBP12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 C1orf186Q6ZWK4 172 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 RNF148Q8N7C7 305 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 ADAMTS15Q8TE58 950 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 KIAA1143Q96AT1 154 aaPredicted RBP12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 TLR9Q9NR96 1032 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 C22orf31O95567 290 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 MLYCDO95822 493 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 CYB5D2Q8WUJ1 264 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
AC006001.3-201ENST00000449307 APOC4-APOC2K7ER74 178 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SYN3O14994 580 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 APOC2P02655 101 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 GJA1P17302 382 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 TFEBP19484 476 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RHBDF2Q6PJF5 856 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 KYQ8NBH2 561 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RBM18Q96H35 190 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 IL25Q9H293 177 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 PCDHA2Q9Y5H9 948 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 CAPN6Q9Y6Q1 641 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 E9PAM4 449 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 TP73O15350 636 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 CCZ1BP86790 482 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 CCZ1P86791 482 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RRP1BQ14684 758 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 FAM46DQ8NEK8 389 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RP9Q8TA86 221 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 COQ7Q99807 217 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 TMEM79Q9BSE2 394 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 AGO3Q9H9G7 860 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 DDX3XO00571 662 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SPAM1P38567 509 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 GPD2P43304 727 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SPIBQ01892 262 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 INTS6LQ5JSJ4 861 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 KCTD8Q6ZWB6 473 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 ATCAYQ86WG3 371 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SH3RF2Q8TEC5 729 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 CENPIQ92674 756 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 EXD2Q9NVH0 621 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 ZNF8P17098 575 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 BRMS1LQ5PSV4 323 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RSBN1Q5VWQ0 802 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 ANO7Q6IWH7 933 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 TMEM161BQ8NDZ6 487 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 C12orf66Q96MD2 445 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SMIM28A0A1B0GU29 152 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 A6NCN8 305 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 TCEA3O75764 348 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SLC35G6P0C7Q6 338 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 LINC00032P0C843 101 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 MATKP42679 507 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 CLCN5P51795 746 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 RHBDL3P58872 404 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 PPP3CAQ08209 521 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 DMTNQ08495 405 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 KRR1Q13601 381 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 MMAAQ8IVH4 418 aaKnown RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 VPS35Q96QK1 796 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 ZNF607Q96SK3 696 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 C6orf62Q9GZU0 229 aaPredicted RBP12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 EFCAB10A6NFE3 127 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 PTGES3LE9PB15 166 aa12.74□□□□□ -0.37
AC006001.3-201ENST00000449307 IDH3BO43837 385 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms