RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 NUS1Q96E22 293 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 TEX101Q9BY14 249 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 GSDMCQ9BYG8 508 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 SYNDIG1Q9H7V2 258 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 AMACRQ9UHK6 382 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 LCMT1Q9UIC8 334 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 DNPEPQ9ULA0 475 aa16.34■□□□□ 0.21
CTDSP1-204ENST00000443891 A0A1W2PQM1 296 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 MYO1FO00160 1098 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 NVLO15381 856 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 NOBOXO60393 691 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 SERPING1P05155 500 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 MMP13P45452 471 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 CFHR1Q03591 330 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 ZFP36L1Q07352 338 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 DPTQ07507 201 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 ILF3Q12906 894 aaKnown RBP eCLIP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 ARHGEF7Q14155 803 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 CNGA3Q16281 694 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 HADHQ16836 314 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 TAF1BQ53T94 588 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 ARMC12Q5T9G4 340 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 ARHGAP40Q5TG30 622 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 XKR5Q6UX68 686 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 USP45Q70EL2 814 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 C17orf82Q86X59 251 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 FAM71BQ8TC56 605 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 HSPH1Q92598 858 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 FATE1Q969F0 183 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 DTD2Q96FN9 168 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 MCCC1Q96RQ3 725 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 TMEM168Q9H0V1 697 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 CYP4F12Q9HCS2 524 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 RABGEF1Q9UJ41 708 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 PCDHGC4Q9Y5F7 938 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 RP1P56715 2156 aa16.33■□□□□ 0.2
CTDSP1-204ENST00000443891 C1QL1O75973 258 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 PGLSO95336 258 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 CYP1A2P05177 515 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 SKILP12757 684 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 CCNB1P14635 433 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 UGT1A5P35504 534 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 ZBED6P86452 979 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 SLC25A11Q02978 314 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 SMTNL2Q2TAL5 461 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 SPECC1LQ69YQ0 1117 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 TIGD7Q6NT04 549 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 FOXR1Q6PIV2 292 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 TEX26Q8N6G2 289 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 PDCD6IPQ8WUM4 868 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 NSMCE3Q96MG7 304 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 CCNL2Q96S94 520 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 CMKLR1Q99788 373 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 DPEP2Q9H4A9 486 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 NOD2Q9HC29 1040 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 CPNE5Q9HCH3 593 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 PCDH18Q9HCL0 1135 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 ETNK2Q9NVF9 386 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 AKAP7Q9P0M2 348 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 LRIT1Q9P2V4 623 aa16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 ATXN7L1Q9ULK2 861 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-204ENST00000443891 CEACAM5P06731 702 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 IVLP07476 585 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 JMJD7P0C870 316 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF30P17039 623 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 CD82P27701 267 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 PBX1P40424 430 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 CLN3Q13286 438 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 NR1D2Q14995 579 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 ALG1LQ6GMV1 187 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 PCSK4Q6UW60 755 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 CCDC81Q6ZN84 652 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF438Q7Z4V0 828 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 SPRED1Q7Z699 444 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 B3GNT8Q7Z7M8 397 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 HEATR4Q86WZ0 1026 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 TP53INP2Q8IXH6 220 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF843Q8N446 348 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 DPYSL5Q9BPU6 564 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 LGR4Q9BXB1 951 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 FRMD8Q9BZ67 464 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 POLR1EQ9GZS1 481 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 CARS2Q9HA77 564 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 MRPL40Q9NQ50 206 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 MOSPD1Q9UJG1 213 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 ANAPC7Q9UJX3 599 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 CAPN11Q9UMQ6 739 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 SLC17A4Q9Y2C5 497 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 LRRK1Q38SD2 2015 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 LRP4O75096 1905 aa16.31■□□□□ 0.2
CTDSP1-204ENST00000443891 FZD6O60353 706 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms