RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 POLR2EP19388 210 aaKnown RBP16.83■□□□□ 0.28
PMS1-213ENST00000441310 LIPMQ5VYY2 423 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 FAM219BQ5XKK7 198 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 CYP4V2Q6ZWL3 525 aaPredicted RBP16.83■□□□□ 0.28
PMS1-213ENST00000441310 URGCPQ8TCY9 931 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 ARNTL2Q8WYA1 636 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 MRPL45Q9BRJ2 306 aaKnown RBP16.83■□□□□ 0.28
PMS1-213ENST00000441310 NGRNQ9NPE2 291 aaKnown RBP16.83■□□□□ 0.28
PMS1-213ENST00000441310 FLRT1Q9NZU1 646 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 VTI1BQ9UEU0 232 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 RAD54BQ9Y620 910 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 ANK1P16157 1881 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 MAN1A2O60476 641 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 ENDOD1O94919 500 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 RASAL1O95294 804 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 PGAM1P18669 254 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 HOXA11P31270 313 aaPredicted RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 RPS9P46781 194 aaKnown RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 FPGSQ05932 587 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 OLIG2Q13516 323 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 GRB14Q14449 540 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.82■□□□□ 0.28
PMS1-213ENST00000441310 C4orf22Q6V702 233 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 LSMEM2Q8N112 164 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 PSMA8Q8TAA3 256 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 CERS2Q96G23 380 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 CENPNQ96H22 339 aaPredicted RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 ASB7Q9H672 318 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 ABCB10Q9NRK6 738 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 TSPAN16Q9UKR8 245 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 V9GYQ6 96 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 PLXNA1Q9UIW2 1896 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 SDHDO14521 159 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 AXIN1O15169 862 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 ACOX3O15254 700 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 CDH1P12830 882 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 PSMA4P25789 261 aaKnown RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 SPRP35270 261 aaPredicted RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 RBP5P82980 135 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 FAM187BQ17R55 369 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 WDR45BQ5MNZ6 344 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 OTUD3Q5T2D3 398 aaPredicted RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 ARMC8Q8IUR7 673 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.82■□□□□ 0.28
PMS1-213ENST00000441310 SUN5Q8TC36 379 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 NFKBIZQ9BYH8 718 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 MOV10Q9HCE1 1003 aaKnown RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 CHRAC1Q9NRG0 131 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 TBC1D13Q9NVG8 400 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 MORF4L1Q9UBU8 362 aa16.82■□□□□ 0.28
PMS1-213ENST00000441310 TRIP12Q14669 1992 aaPredicted RBP16.82■□□□□ 0.28
PMS1-213ENST00000441310 H2AFYO75367 372 aaKnown RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 NADKO95544 446 aaPredicted RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 DLGAP3O95886 979 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 HSPA1AP0DMV8 641 aaKnown RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 HSPA1BP0DMV9 641 aaKnown RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 PDGFRAP16234 1089 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 HTR1BP28222 390 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 CDH5P33151 784 aaPredicted RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 ATP6V0D1P61421 351 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 INPP5AQ14642 412 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 PPP1R3AQ16821 1122 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 GRTP1Q5TC63 336 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 CYS1Q717R9 158 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 CDKL3Q8IVW4 592 aaPredicted RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 TMEM40Q8WWA1 233 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 RXFP2Q8WXD0 754 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 LRCH3Q96II8 777 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 PARK7Q99497 189 aaKnown RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 RBBP8Q99708 897 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 ZBED2Q9BTP6 218 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 THG1LQ9NWX6 298 aaKnown RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 IDH3BO43837 385 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 UGT2B4P06133 528 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 SMIM10L2AP0DMW4 78 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 SMIM10L2BP0DMW5 78 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 IL7RP16871 459 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 AVPR1AP37288 418 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 GPD2P43304 727 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 HUNKP57058 714 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 IMPG1Q17R60 797 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 TMTC4Q5T4D3 741 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 RSBN1Q5VWQ0 802 aaPredicted RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 TMEM236Q5W0B7 351 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 SCML4Q8N228 414 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 PNPT1Q8TCS8 783 aaKnown RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 S100ZQ8WXG8 99 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 HDAC11Q96DB2 347 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 CPNE1Q99829 537 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 B3GNT5Q9BYG0 378 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 TRIM8Q9BZR9 551 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 TMEM181Q9P2C4 612 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 SLC39A10Q9ULF5 831 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 TANC1Q9C0D5 1861 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 RGS13O14921 159 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 TGM2P21980 687 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 SHMT2P34897 504 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms