RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.5□□□□□ -0.57
NEFM-203ENST00000437366 TRAF6Q9Y4K3 522 aa11.5□□□□□ -0.57
NEFM-203ENST00000437366 C2orf78A6NCI8 922 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SLCO1B7G3V0H7 640 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ATXN1LP0C7T5 689 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 CTPS1P17812 591 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ECT2LQ008S8 904 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 FRG1Q14331 258 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 HECTD3Q5T447 861 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 RNF220Q5VTB9 566 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 AFMIDQ63HM1 303 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 KIAA0408Q6ZU52 694 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ANKS3Q6ZW76 656 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 RP9Q8TA86 221 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 PTERQ96BW5 349 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 PCDHAC1Q9H158 963 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 RNF112Q9ULX5 631 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 CAPN8A6NHC0 703 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 E5RI56 91 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SDHDO14521 159 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SLC7A4O43246 635 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 COCHO43405 550 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 STX1BP61266 288 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 BFSP2Q13515 415 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ACAP2Q15057 778 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 PAOXQ6QHF9 649 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 CNDP1Q96KN2 507 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SEMA6AQ9H2E6 1030 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ZBTB26Q9HCK0 441 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 TIMM22Q9Y584 194 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 IQCF5A8MTL0 148 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 TARM1B6A8C7 271 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 H7C4K7 107 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 PSMD12O00232 456 aaPredicted RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 OR1I1O60431 355 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 PRAMEF11O60813 436 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SMNDC1O75940 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
NEFM-203ENST00000437366 C1RP00736 705 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 LINC00032P0C843 101 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 MBL2P11226 248 aaPredicted RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 PAX3P23760 479 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ALDH1A3P47895 512 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 MRPS35P82673 323 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 HTRA3P83110 453 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 PTPRNQ16849 979 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 DEFB115Q30KQ5 88 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 PAQR3Q6TCH7 311 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 ZNF683Q8IZ20 524 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 PPWD1Q96BP3 646 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 CDKN2AIPNLQ96HQ2 116 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 HBEGFQ99075 208 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
NEFM-203ENST00000437366 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 SEPT3Q9UH03 358 aa11.49□□□□□ -0.57
NEFM-203ENST00000437366 TSC2P49815 1807 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 CCDC189A1A4V9 331 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 C2orf81A6NN90 581 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 BTN3A1O00481 513 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 NR5A2O00482 541 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 RPP40O75818 363 aaKnown RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 FGF1P05230 155 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 FGFR3P22607 806 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 MAGEA11P43364 429 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 PRKAA2P54646 552 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 MTTPP55157 894 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 TCTN1Q2MV58 587 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 SFT2D3Q587I9 215 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 FAM45BPQ6NSW5 357 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
NEFM-203ENST00000437366 ISCA2Q86U28 154 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 NPAS4Q8IUM7 802 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 FAM45AQ8TCE6 357 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 TRIM8Q9BZR9 551 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 KLHL4Q9C0H6 718 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 MRM3Q9HC36 420 aaKnown RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 AGO1Q9UL18 857 aaKnown RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 FCF1Q9Y324 198 aaKnown RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 PCDHB9Q9Y5E1 797 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 WASH4PA8MWX3 477 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 UBFD1O14562 309 aaKnown RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 GIPC1O14908 333 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 STX7O15400 261 aaKnown RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 VNN2O95498 520 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 CRTAMO95727 393 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 KLKB1P03952 638 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 HLA-DPA1P20036 260 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 FAM189BP81408 668 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 ATXN7L2Q5T6C5 722 aaPredicted RBP11.48□□□□□ -0.57
NEFM-203ENST00000437366 ZNF549Q6P9A3 640 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 IFNEQ86WN2 208 aa11.48□□□□□ -0.57
NEFM-203ENST00000437366 ICA1LQ8NDH6 482 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms