RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 TBATAQ96M53 351 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 NSMCE3Q96MG7 304 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 ZNF778Q96MU6 729 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 GPR22Q99680 433 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 KXD1Q9BQD3 176 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 VPS11Q9H270 941 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 CCDC134Q9H6E4 229 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 CATSPERZQ9NTU4 200 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 GTSE1Q9NYZ3 720 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 PPM1HQ9ULR3 514 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 SLC30A1Q9Y6M5 507 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 NUMBLQ9Y6R0 609 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 CHD7Q9P2D1 2997 aa9.62□□□□□ -0.87
HDLBP-211ENST00000425989 KIAA1549LQ6ZVL6 1849 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 A0A1W2PPM1 405 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 TMEM120BA0PK00 339 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 OTOL1A6NHN0 477 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-211ENST00000425989 TTC34A8MYJ7 566 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 C1QTNF3-AMACRE9PGA6 284 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 H0Y858 1186 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 MAN2B1O00754 1011 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 TYROBPO43914 113 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 SHOX2O60902 331 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-211ENST00000425989 RFPL1O75677 317 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 S1PR4O95977 384 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 GOT2P00505 430 aaKnown RBP9.61□□□□□ -0.87
HDLBP-211ENST00000425989 APOA4P06727 396 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 PYGBP11216 843 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 PTGER3P43115 390 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 MRPS21P82921 87 aaKnown RBP9.61□□□□□ -0.87
HDLBP-211ENST00000425989 CACNG1Q06432 222 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 ELP6Q0PNE2 266 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDLBP-211ENST00000425989 ARHGEF7Q14155 803 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 ZNF234Q14588 700 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 CDKN3Q16667 212 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 LEXMQ3ZCV2 418 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 C9orf64Q5T6V5 341 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 UGT3A1Q6NUS8 523 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 SERPINA13PQ6UXR4 307 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 Q6ZVU0 165 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 TTC7BQ86TV6 843 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 C12orf40Q86WS4 652 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 DENND1AQ8TEH3 1009 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 CYB5D2Q8WUJ1 264 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 TSNARE1Q96NA8 513 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 KLHL32Q96NJ5 620 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 PLEKHG4BQ96PX9 1271 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 AGAP2Q99490 1192 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 ZDHHC6Q9H6R6 413 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 POPDC3Q9HBV1 291 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 DYRK4Q9NR20 520 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-211ENST00000425989 CTNNAL1Q9UBT7 734 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 SLC2A6Q9UGQ3 507 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 MID2Q9UJV3 735 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 SCML1Q9UN30 329 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 VWA7Q9Y334 891 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 ARL5AQ9Y689 179 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 WASF2Q9Y6W5 498 aa9.61□□□□□ -0.87
HDLBP-211ENST00000425989 A0A087X1B8 175 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 C1orf232A0A0U1RR37 186 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 CCDC162PA2VCL2 907 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 C16orf96A6NNT2 1141 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 UPK3BL1B0FP48 263 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 UPK3BL2E5RIL1 263 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 H3BMM5 538 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 TRIM24O15164 1050 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 BIRC5O15392 142 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 GLRA3O75311 464 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 NDUFS3O75489 264 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 LEFTY1O75610 366 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 GJB3O75712 270 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 PIGNO95427 931 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 UGT2B4P06133 528 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 C7P10643 843 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 CHN1P15882 459 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 TIMP2P16035 220 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 STMN1P16949 149 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 ITGB7P26010 798 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 ARNTP27540 789 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 VIPR1P32241 457 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 CCNFP41002 786 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 MAGEA12P43365 314 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 KPNA2P52292 529 aaKnown RBP9.6□□□□□ -0.87
HDLBP-211ENST00000425989 PRKAA2P54646 552 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 ITGA9Q13797 1035 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 EFTUD2Q15029 972 aaKnown RBP eCLIP9.6□□□□□ -0.872e-8■■■■■ 28
HDLBP-211ENST00000425989 SMAD2Q15796 467 aaKnown RBP9.6□□□□□ -0.87
HDLBP-211ENST00000425989 CRY1Q16526 586 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 TYSND1Q2T9J0 566 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 TSNAXIP1Q2TAA8 658 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 CCDC153Q494R4 210 aa9.6□□□□□ -0.87
HDLBP-211ENST00000425989 TAF1BQ53T94 588 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms