RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CMKLR1Q99788 373 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 FRMD8Q9BZ67 464 aaPredicted RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 DPEP2Q9H4A9 486 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 DHX35Q9H5Z1 703 aaKnown RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 RDH14Q9HBH5 336 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 CWC15Q9P013 229 aaKnown RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 PCDHGA4Q9Y5G9 962 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 FLNCQ14315 2725 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 SPTA1P02549 2419 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 B4DGG1 531 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 AGRPO00253 132 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 CPNE6O95741 557 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 MYCLP1P12525 358 aaPredicted RBP14.99□□□□□ -0.01
ATG4B-209ENST00000425239 KELP23276 732 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 MIPP30301 263 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 SCNN1BP51168 640 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 MAZP56270 477 aaKnown RBP14.99□□□□□ -0.01
ATG4B-209ENST00000425239 AP1S1P61966 158 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 CYP4F2P78329 520 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 UBXN1Q04323 297 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 NFATC3Q12968 1075 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 SQSTM1Q13501 440 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 PTPRRQ15256 657 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 CNGA3Q16281 694 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 TBR1Q16650 682 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 VASH2Q86V25 355 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 NAGSQ8N159 534 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 PMEPA1Q969W9 287 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 SCARF2Q96GP6 870 aaPredicted RBP14.99□□□□□ -0.01
ATG4B-209ENST00000425239 WDR26Q9H7D7 661 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 PARVAQ9NVD7 372 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 PCSK1NQ9UHG2 260 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 PPIL1Q9Y3C6 166 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 PCDHGC4Q9Y5F7 938 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 NAV2Q8IVL1 2488 aa14.99□□□□□ -0.01
ATG4B-209ENST00000425239 IGHV5-10-1A0A0J9YXX1 117 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ANKRD62A6NC57 917 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 PPM1DO15297 605 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 SUV39H1O43463 412 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 LRCH4O75427 683 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 HEXIM1O94992 359 aaKnown RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ECEL1O95672 775 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 FGF3P11487 239 aaPredicted RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 LHCGRP22888 699 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 AK4P27144 223 aaPredicted RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 CSRP3P50461 194 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ARHGEF7Q14155 803 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 LBRQ14739 615 aaKnown RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ACOX1Q15067 660 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 HSD11B1LQ7Z5J1 315 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 TECPR1Q7Z6L1 1165 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 PIM3Q86V86 326 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 PSTKQ8IV42 348 aaKnown RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 FNIP1Q8TF40 1166 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 PATE1Q8WXA2 126 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ZNF599Q96NL3 588 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 NUDT22Q9BRQ3 303 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 FUCA2Q9BTY2 467 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 CINPQ9BW66 212 aaPredicted RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 SLC12A9Q9BXP2 914 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 SEPT11Q9NVA2 429 aaKnown RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 ETNK2Q9NVF9 386 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 TRNAU1APQ9NX07 287 aaKnown RBP14.98□□□□□ -0.01
ATG4B-209ENST00000425239 TAAR2Q9P1P5 351 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 IL17BQ9UHF5 180 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 SLC17A4Q9Y2C5 497 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 PCDHGA3Q9Y5H0 932 aa14.98□□□□□ -0.01
ATG4B-209ENST00000425239 NBPF19A0A087WUL8 3843 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 DFFAO00273 331 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 TEX33O43247 280 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 MAFKO60675 156 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 SOD1P00441 154 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 FAM87AP0C7U9 286 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 FERP16591 822 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 PSMA2P25787 234 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 CD82P27701 267 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 IL1R2P27930 398 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 ETV3P41162 512 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 POLD2P49005 469 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 MAPK10P53779 464 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 NFKB2Q00653 900 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 IHHQ14623 411 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 CLCA4Q14CN2 919 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 CLPPQ16740 277 aaPredicted RBP14.97□□□□□ -0.01
ATG4B-209ENST00000425239 TSR1Q2NL82 804 aaKnown RBP14.97□□□□□ -0.01
ATG4B-209ENST00000425239 MANEAQ5SRI9 462 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 HEATR4Q86WZ0 1026 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 RCBTB1Q8NDN9 531 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 ZDHHC1Q8WTX9 485 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 NKD1Q969G9 470 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 DTD2Q96FN9 168 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 MCCC1Q96RQ3 725 aaPredicted RBP14.97□□□□□ -0.01
ATG4B-209ENST00000425239 SPRY4Q9C004 299 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 CARS2Q9HA77 564 aaKnown RBP14.97□□□□□ -0.01
ATG4B-209ENST00000425239 SP110Q9HB58 689 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 NOD2Q9HC29 1040 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 SUFUQ9UMX1 484 aa14.97□□□□□ -0.01
ATG4B-209ENST00000425239 PLEKHM1Q9Y4G2 1056 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms