RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SLC22A17Q8WUG5 538 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 FKBP10Q96AY3 582 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 RTP4Q96DX8 246 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 XYLT2Q9H1B5 865 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 IL37Q9NZH6 218 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 COQ3Q9NZJ6 369 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ILVBLA1L0T0 632 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 AP3D1O14617 1153 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 OGTO15294 1046 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SNX2O60749 519 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 UGT2B4P06133 528 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC35E2BP0CK96 405 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 TPSB2P20231 275 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SDC4P31431 198 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CSHL1Q14406 222 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 TPSAB1Q15661 275 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ATP6AP1Q15904 470 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 AMHR2Q16671 573 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ZYG11AQ6WRX3 759 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 OR7A2PQ8NGA2 310 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 TRIB2Q92519 343 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 TSNARE1Q96NA8 513 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 TUBA1CQ9BQE3 449 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ANKEF1Q9NU02 776 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ADPRHL2Q9NX46 363 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 RASAL1O95294 804 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ASNSP08243 561 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 UBL4AP11441 157 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 YBX3P16989 372 aaKnown RBP eCLIP11.3□□□□□ -0.63e-19■■■□□ 16.3
SEC61A1-202ENST00000424880 PROZP22891 400 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 PIGAP37287 484 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CTF1Q16619 201 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 COLEC12Q5KU26 742 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 STEAP4Q687X5 459 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CLEC14AQ86T13 490 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 GALNT13Q8IUC8 556 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ADGRG5Q8IZF4 528 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ZNF567Q8N184 647 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 C7orf31Q8N865 590 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CLEC4DQ8WXI8 215 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 BIRC7Q96CA5 298 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 UHRF1Q96T88 793 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 TOR3AQ9H497 397 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 WDR6Q9NNW5 1121 aaKnown RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 TLR9Q9NR96 1032 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CMTM6Q9NX76 183 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 PCDHGA11Q9Y5H2 935 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 U3KQV3 271 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 WNT10BO00744 389 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 HOXC11O43248 304 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CCNKO75909 580 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 LYPLA2O95372 231 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ITGB3P05106 788 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ALDOCP09972 364 aaKnown RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CXCL8P10145 99 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CDH5P33151 784 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 MRPS15P82914 257 aaKnown RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 EPS8Q12929 822 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 FAM83EQ2M2I3 478 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CEP78Q5JTW2 689 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 OR10Q1Q8NGQ4 319 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 RDH11Q8TC12 318 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 FAM151AQ8WW52 585 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ATL1Q8WXF7 558 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 MCRS1Q96EZ8 462 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 NRBF2Q96F24 287 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 MAGEE1Q9HCI5 957 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 THG1LQ9NWX6 298 aaKnown RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 PIM2Q9P1W9 311 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 NUP205Q92621 2012 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 A0A0A0MRY4 1105 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 A0A0J9YYE9 177 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ZCWPW2A0A1B0GU75 182 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 B4GALT5O43286 388 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 TIMM44O43615 452 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 IDH3BO43837 385 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 LRIG2O94898 1065 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 MYCLP1P12525 358 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms