RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TMEM159Q96B96 161 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 TRIM7Q9C029 511 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 SEMA4CQ9C0C4 833 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 HAUS4Q9H6D7 363 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 CARS2Q9HA77 564 aaKnown RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 PHPT1Q9NRX4 125 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 KCTD5Q9NXV2 234 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 GOLGA6AQ9NYA3 693 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 CWC15Q9P013 229 aaKnown RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 LRIT1Q9P2V4 623 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 MYO1AQ9UBC5 1043 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 RNF215Q9Y6U7 377 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 ASH1LQ9NR48 2969 aaKnown RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 TENM4Q6N022 2769 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 FTLP02792 175 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-205ENST00000423214 LIPCP11150 499 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 VIPR1P32241 457 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 TRIM23P36406 574 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 HCAR3P49019 387 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 SLC10A7Q0GE19 358 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 ILF3Q12906 894 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL18A1-205ENST00000423214 BIRC2Q13490 618 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 HLTFQ14527 1009 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL18A1-205ENST00000423214 CNGA3Q16281 694 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 SMTNL2Q2TAL5 461 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 OGFOD3Q6PK18 319 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 HEATR4Q86WZ0 1026 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 ATPAF2Q8N5M1 289 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 NSMCE1Q8WV22 266 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 HSPH1Q92598 858 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 MED8Q96G25 268 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 CMKLR1Q99788 373 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 LGR4Q9BXB1 951 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 GSDMCQ9BYG8 508 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 MRPL47Q9HD33 250 aaKnown RBP16.17■□□□□ 0.18
COL18A1-205ENST00000423214 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
COL18A1-205ENST00000423214 AKAP7Q9P0M2 348 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-205ENST00000423214 SEPT10Q9P0V9 454 aa16.17■□□□□ 0.18
COL18A1-205ENST00000423214 ZW10O43264 779 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 NUDT21O43809 227 aaKnown RBP16.16■□□□□ 0.18
COL18A1-205ENST00000423214 MYBL1P10243 752 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 CYP2A6P11509 494 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-205ENST00000423214 GZMAP12544 262 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 GM2AP17900 193 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 ITIH1P19827 911 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 SERPINB6P35237 376 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 MAPK10P53779 464 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 KLHL30Q0D2K2 578 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 IQCB1Q15051 598 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 RAET1GQ6H3X3 334 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 USP53Q70EK8 1073 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 ZNF571Q7Z3V5 609 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-205ENST00000423214 PELI3Q8N2H9 469 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 CCL4L1Q8NHW4 92 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 COQ10AQ96MF6 247 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 NAP1L5Q96NT1 182 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-205ENST00000423214 NUDCD1Q96RS6 583 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL18A1-205ENST00000423214 ACSL6Q9UKU0 697 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 PCDHGC4Q9Y5F7 938 aa16.16■□□□□ 0.18
COL18A1-205ENST00000423214 MYO18BQ8IUG5 2567 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 TTC24A2A3L6 582 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-205ENST00000423214 RHPN2P1A8MT19 583 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 NVLO15381 856 aaKnown RBP16.15■□□□□ 0.18
COL18A1-205ENST00000423214 HTRA2O43464 458 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-205ENST00000423214 CCNB1P14635 433 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 PCK1P35558 622 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 GNPDA1P46926 289 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 MAZP56270 477 aaKnown RBP16.15■□□□□ 0.18
COL18A1-205ENST00000423214 DPYSL2Q16555 572 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 TDRD12Q587J7 1177 aaKnown RBP16.15■□□□□ 0.18
COL18A1-205ENST00000423214 USP45Q70EL2 814 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 SFTPA2Q8IWL1 248 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 TP53INP2Q8IXH6 220 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 ZDHHC1Q8WTX9 485 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 DTD2Q96FN9 168 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 MGME1Q9BQP7 344 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
COL18A1-205ENST00000423214 PRAMEF33A0A0G2JMD5 474 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 B8ZZF3 427 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PSMD11O00231 422 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 DDX3XO00571 662 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PRAMEF10O60809 474 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 HEXIM1O94992 359 aaKnown RBP16.14■□□□□ 0.17
COL18A1-205ENST00000423214 KRT10P13645 584 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 ETV3P41162 512 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PRKCIP41743 596 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 CDH6P55285 790 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 ZFP36L1Q07352 338 aaKnown RBP16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PEX6Q13608 980 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 TGIF1Q15583 401 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 AMZ1Q400G9 498 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 MANEAQ5SRI9 462 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 E4F1Q66K89 784 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PIM3Q86V86 326 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 SLITRK4Q8IW52 837 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 GPBAR1Q8TDU6 330 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 NSMCE3Q96MG7 304 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms