RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SETMARQ53H47 684 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 LRRC66Q68CR7 880 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 KCTD11Q693B1 232 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 HSD11B1LQ7Z5J1 315 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 KLHDC8BQ8IXV7 354 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 CBARPQ8N350 705 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 ZCCHC9Q8N567 271 aaKnown RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 SPATA4Q8NEY3 305 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 KIF18AQ8NI77 898 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 SERAC1Q96JX3 654 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 SLC6A18Q96N87 628 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 PPP1R2P1Q96PQ5 205 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 MYOCQ99972 504 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 TBL1YQ9BQ87 522 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 SMOC1Q9H4F8 434 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 GOLGA6AQ9NYA3 693 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 CDC23Q9UJX2 597 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 GMEB2Q9UKD1 530 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 TPX2Q9ULW0 747 aaKnown RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 SHOC2Q9UQ13 582 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 NEU2Q9Y3R4 380 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 PCDHGA5Q9Y5G8 931 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 SPO11Q9Y5K1 396 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 C1orf232A0A0U1RR37 186 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 PATE3B3GLJ2 98 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 PRAMEF26H0Y7S4 382 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 CCDC188H7C350 402 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 AURKAO14965 403 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 BCAT2O15382 392 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 PSMD3O43242 534 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 RECQL5O94762 991 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 ECEL1O95672 775 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 AP2A1O95782 977 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 APRTP07741 180 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 HOXB3P14651 431 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 GNSP15586 552 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 TPH1P17752 444 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 GM2AP17900 193 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 HLA-DPA1P20036 260 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 HNRNPA2B1P22626 353 aaKnown RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 AKT2P31751 481 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 NUDT1P36639 197 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 MPLP40238 635 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 ETV3P41162 512 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 CLDN2P57739 230 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 BASP1P80723 227 aaKnown RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 MRPS25P82663 173 aaKnown RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 SEMA5AQ13591 1074 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 STAT4Q14765 748 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 PPP1R7Q15435 360 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 WSCD2Q2TBF2 565 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 NAPEPLDQ6IQ20 393 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 DENND5AQ6IQ26 1287 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 LAYNQ6UX15 382 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 C4orf22Q6V702 233 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 KDM7AQ6ZMT4 941 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 Q6ZVL8 140 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 GRK7Q8WTQ7 553 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 ASB12Q8WXK4 309 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 CENPTQ96BT3 561 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 LRRC45Q96CN5 670 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 COQ10AQ96MF6 247 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 LYSMD1Q96S90 227 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 KRT12Q99456 494 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 LRRC40Q9H9A6 602 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 ZFYVE1Q9HBF4 777 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 MAGEE1Q9HCI5 957 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 TM9SF3Q9HD45 589 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 MBNL1Q9NR56 388 aaKnown RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 AASDHPPTQ9NRN7 309 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 PIH1D1Q9NWS0 290 aaKnown RBP9.28□□□□□ -0.92
PDGFC-202ENST00000422544 NCDNQ9UBB6 729 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 PCYOX1Q9UHG3 505 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 DMTF1Q9Y222 760 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 CELSR3Q9NYQ7 3312 aa9.28□□□□□ -0.92
PDGFC-202ENST00000422544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.27□□□□□ -0.93
PDGFC-202ENST00000422544 A0A1B0GTW7 788 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 TCRBV7S3A2A0A539 114 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 H0Y8X5 98 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 SUN1O94901 812 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 GAS8O95995 478 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 SLC4A1P02730 911 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 WNT1P04628 370 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 CFIP05156 583 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 FGF1P05230 155 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 C1SP09871 688 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 ZNF30P17039 623 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 ADCY8P40145 1251 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 GRIA1P42261 906 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 DPP6P42658 865 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 CSNK1EP49674 416 aaKnown RBP9.27□□□□□ -0.93
PDGFC-202ENST00000422544 STC1P52823 247 aa9.27□□□□□ -0.93
PDGFC-202ENST00000422544 RACK1P63244 317 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms