RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ESRP1Q6NXG1 681 aaKnown RBP18.67■□□□□ 0.58
PTCD3-204ENST00000418628 KDM7AQ6ZMT4 941 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 FAM71DQ8N9W8 422 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 MAIP1Q8WWC4 291 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 C1orf54Q8WWF1 131 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 SKA1Q96BD8 255 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 KLHDC7BQ96G42 594 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 WDR24Q96S15 920 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 OSBPL9Q96SU4 736 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 ADGRE3Q9BY15 652 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 GAREM1Q9H706 876 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 IL21RQ9HBE5 538 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 UBP1Q9NZI7 540 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 SNX12Q9UMY4 172 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 PTPRBP23467 1997 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 A0A0U1RQS6 177 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 A0A1B0GTQ1 180 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 A8MX80 341 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 CEP104O60308 925 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PMPCBO75439 489 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 STK10O94804 968 aaKnown RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 RXRGP48443 463 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 EPHB1P54762 984 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PTSQ03393 145 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 MTM1Q13496 603 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PCSK7Q16549 785 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 RSPO4Q2I0M5 234 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 P3H1Q32P28 736 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 KCTD11Q693B1 232 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 DBX2Q6ZNG2 339 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PTAR1Q7Z6K3 402 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 DCP2Q8IU60 420 aaKnown RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PELI3Q8N2H9 469 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PAF1Q8N7H5 531 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 COG1Q8WTW3 980 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 EID2BQ96D98 161 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 ELF4Q99607 663 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 GTPBP2Q9BX10 602 aaKnown RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 MAGEE1Q9HCI5 957 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 GDF3Q9NR23 364 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 KCTD5Q9NXV2 234 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 NFKBIL1Q9UBC1 381 aaPredicted RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 CDV3Q9UKY7 258 aaKnown RBP18.66■□□□□ 0.58
PTCD3-204ENST00000418628 PCDHGB2Q9Y5G2 931 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 BPTFQ12830 3046 aa18.66■□□□□ 0.58
PTCD3-204ENST00000418628 SPTY2D1-AS1A0A0U1RR47 76 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 F5H423 210 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-204ENST00000418628 LZTS3O60299 673 aaPredicted RBP18.65■□□□□ 0.58
PTCD3-204ENST00000418628 DFNA5O60443 496 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 ANXA9O76027 345 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 CD59P13987 128 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 HLA-DPA1P20036 260 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 TEAD1P28347 426 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 STIP1P31948 543 aaKnown RBP18.65■□□□□ 0.58
PTCD3-204ENST00000418628 TRIM23P36406 574 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 ETV3P41162 512 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 GEMP55040 296 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 YPEL5P62699 121 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 DPTQ07507 201 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 SLC14A1Q13336 389 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 ARHGEF7Q14155 803 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 SLC1A5Q15758 541 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 Q6ZSR6 202 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 ZNF765Q7L2R6 523 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 KANSL1Q7Z3B3 1105 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 OXR1Q8N573 874 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 PRELID2Q8N945 189 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 PLA2G15Q8NCC3 412 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 NUS1Q96E22 293 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 IFT43Q96FT9 208 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 PPP1R2P1Q96PQ5 205 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 RTKNQ9BST9 563 aa18.65■□□□□ 0.58
PTCD3-204ENST00000418628 PCDHGA12O60330 932 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 METTL18O95568 372 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 SOD1P00441 154 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 SDHBP21912 280 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 CHRNA4P43681 627 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 ATXN3P54252 364 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-204ENST00000418628 MSLNQ13421 630 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-204ENST00000418628 FZD2Q14332 565 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 ACOX1Q15067 660 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 CYP1B1Q16678 543 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 SIRPB2Q5JXA9 342 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 PAPD7Q5XG87 772 aaKnown RBP18.64■□□□□ 0.57
PTCD3-204ENST00000418628 RANBP10Q6VN20 620 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 RFLNAQ6ZTI6 216 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 Q6ZVL8 140 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 PIP4P1Q86T03 277 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 NLRP8Q86W28 1048 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 IPMKQ8NFU5 416 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 ACTRT1Q8TDG2 376 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 DRG1Q9Y295 367 aaKnown RBP18.64■□□□□ 0.57
PTCD3-204ENST00000418628 AAR2Q9Y312 384 aaKnown RBP18.64■□□□□ 0.57
PTCD3-204ENST00000418628 ZNF711Q9Y462 761 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 SPO11Q9Y5K1 396 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 RP1P56715 2156 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 ASXL3Q9C0F0 2248 aa18.64■□□□□ 0.57
PTCD3-204ENST00000418628 C1orf232A0A0U1RR37 186 aa18.63■□□□□ 0.57
PTCD3-204ENST00000418628 K7ESM1 405 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms