RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 USP46P62068 366 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CAPSQ13938 189 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 ESRP1Q6NXG1 681 aaKnown RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 OAFQ86UD1 273 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 FCRL2Q96LA5 508 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 RNF157Q96PX1 679 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 RASSF1Q9NS23 344 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 GMIPQ9P107 970 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 COPS7AQ9UBW8 275 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 SMIM35A0A1B0GVV1 85 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 ARHGDIBP52566 201 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 SPATA9Q9BWV2 254 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 BCL9O00512 1426 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 ARHGEF28Q8N1W1 1705 aaKnown RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ANXA8L1Q5VT79 327 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 C1orf50Q9BV19 199 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 TNKS2Q9H2K2 1166 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ATXN2Q99700 1313 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 STX16-NPEPL1H3BU86 382 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 STX16O14662 325 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 OR5F1O95221 314 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 FGF1P05230 155 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ITGA3P26006 1051 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 NDUFA5Q16718 116 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 LIN54Q6MZP7 749 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 SLC24A5Q71RS6 500 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 C5orf34Q96MH7 638 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ACP6Q9NPH0 428 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PHF11Q9UIL8 331 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 LEF1Q9UJU2 399 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ERGIC3Q9Y282 383 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 NAA20P61599 178 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PTGES3Q15185 160 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 AP2M1Q96CW1 435 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 MMADHCQ9H3L0 296 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 IFNGP01579 166 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PTPN9P43378 593 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PSMD7P51665 324 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 FOXM1Q08050 763 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 FAM91A1Q658Y4 838 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 RTL4Q6ZR62 310 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ARHGAP36Q6ZRI8 547 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PYDC1Q8WXC3 89 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ZNF670Q9BS34 389 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 MTF2Q9Y483 593 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 GMPPBQ9Y5P6 360 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 COL1A2P08123 1366 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 B4GALT5O43286 388 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ITGAVP06756 1048 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ATP5F1P24539 256 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 TGFBR2P37173 567 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 IFI35P80217 286 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 SP2Q02086 613 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 OLFML2AQ68BL7 652 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 JAZF1Q86VZ6 243 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 IQCF2Q8IXL9 164 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 TOP6BLQ8N6T0 577 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 DNASE1L2Q92874 299 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PRDM12Q9H4Q4 367 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 HCN3Q9P1Z3 774 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 UGT2B4P06133 528 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ARF4P18085 180 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 GPD2P43304 727 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 FAM35AQ86V20 835 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 CLVS1Q8IUQ0 354 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 BTN2A3PQ96KV6 586 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 SPAG4Q9NPE6 437 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 EHD3Q9NZN3 535 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 NPEPPSL1A6NEC2 478 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ADRB2P07550 413 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 CORO7P57737 925 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 CCNYL2Q5T2Q4 361 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ZDHHC20Q5W0Z9 365 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 CAPN13Q6MZZ7 669 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 CXXC5Q7LFL8 322 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 MPP4Q96JB8 637 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 LGMNQ99538 433 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms