RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CAPRIN1Q14444 709 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 VEPH1Q14D04 833 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AOC3Q16853 763 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TOR1AIP1Q5JTV8 583 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 DACT2Q5SW24 774 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 C11orf63Q6NUN7 778 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 IRF2BP2Q7Z5L9 587 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KBTBD6Q86V97 674 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 MICALL2Q8IY33 904 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SLC43A2Q8N370 569 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 MFSD4AQ8N468 514 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SLC30A5Q8TAD4 765 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PHKBQ93100 1093 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 MSANTD3Q96H12 275 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PACSIN2Q9UNF0 486 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 PPIL1Q9Y3C6 166 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGC4Q9Y5F7 938 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGB6Q9Y5F9 930 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGB2Q9Y5G2 931 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGA7Q9Y5G6 932 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGA6Q9Y5G7 932 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGA5Q9Y5G8 931 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGA1Q9Y5H4 931 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 ISPDA4D126 451 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 C2orf74A8MZ97 194 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZNF213O14771 459 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KCNQ3O43525 872 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 NTRK1P04629 796 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 LCKP06239 509 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 GP1BAP07359 652 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PTPN1P18031 435 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 CHMP24386 653 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 DDOSTP39656 456 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 HNF4AP41235 474 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CABP4P57796 275 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 C1QBPQ07021 282 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 CDH17Q12864 832 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TRAF2Q12933 501 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 IKZF1Q13422 519 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 EXOC3L4Q17RC7 722 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KCTD19Q17RG1 926 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 TEX30Q5JUR7 227 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SAPCD1Q5SSQ6 148 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 C6orf52Q5T4I8 152 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ADGRF1Q5T601 910 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AGAP6Q5VW22 663 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SULT1C3Q6IMI6 304 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TYW3Q6IPR3 259 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 MZT2BQ6NZ67 158 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 C3orf33Q6P1S2 294 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 MZT2AQ6P582 158 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TOM1L2Q6ZVM7 507 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CATSPER3Q86XQ3 398 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZNF354CQ86Y25 554 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZDHHC13Q8IUH4 622 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TBC1D10CQ8IV04 446 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PGBD3Q8N328 593 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 HIPK4Q8NE63 616 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ABHD11Q8NFV4 315 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AGAP4Q96P64 663 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CSPG4P5Q96PW8 444 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 FAM83CQ9BQN1 747 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZNF251Q9BRH9 671 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 BBS2Q9BXC9 721 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 WDR12Q9GZL7 423 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 SEMA6BQ9H3T3 888 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SLCO1B3Q9NPD5 702 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CTSFQ9UBX1 484 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AP1M2Q9Y6Q5 423 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SLX4Q8IY92 1834 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 MYH3P11055 1940 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TMEM82A0PJX8 343 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 GIPC1O14908 333 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CYP26A1O43174 497 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 FOXO3O43524 673 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 POP7O75817 140 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 CCNB2O95067 398 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 FCER2P06734 321 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 DLDP09622 509 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 DHRS4L1P0CG22 281 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CYP2A6P11509 494 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 PRF1P14222 555 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CD1EP15812 388 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SPNP16150 400 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CYP2A7P20853 494 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KCNA5P22460 613 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 GCAP28676 217 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 FMO4P31512 558 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TFCP2Q12800 502 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PTPRRQ15256 657 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TTC38Q5R3I4 469 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KIAA0408Q6ZU52 694 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TMEM26Q6ZUK4 368 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AMIGO1Q86WK6 493 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 LACC1Q8IV20 430 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 GUF1Q8N442 669 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 ATG16L2Q8NAA4 619 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KDF1Q8NAX2 398 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 OR8K5Q8NH50 307 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms