RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 MRPL40Q9NQ50 206 aaKnown RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 TMEM181Q9P2C4 612 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ARL5AQ9Y689 179 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 TMEM189-UBE2V1I3L0A0 370 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 PPP6CO00743 305 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 RAMP2O60895 175 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 PGM3O95394 542 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 MT-CO1P00395 513 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 GOT2P00505 430 aaKnown RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ALDOCP09972 364 aaKnown RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 MTHFD2P13995 350 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ACVRL1P37023 503 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 SUOXP51687 545 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 CDH13P55290 713 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 TRAP1Q12931 704 aaKnown RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 RALGDSQ12967 914 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 SEMA3AQ14563 771 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 TRIP4Q15650 581 aaPredicted RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 MGAT5BQ3V5L5 792 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 MIB1Q86YT6 1006 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 GALNT4Q8N4A0 578 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 GPR150Q8NGU9 434 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 LPGAT1Q92604 370 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 SLCO4A1Q96BD0 722 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 DNAJC1Q96KC8 554 aaKnown RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 AP4S1Q9Y587 144 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 DNAJC15Q9Y5T4 150 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 MIA3Q5JRA6 1907 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 MYO16Q9Y6X6 1858 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 IGLV3-27P01718 113 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 FGF4P08620 206 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 GPX3P22352 226 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 ATP4BP51164 291 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 MYBPC1Q00872 1141 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CREB5Q02930 508 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CRHR2Q13324 411 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 BTG3Q14201 252 aaPredicted RBP15.89■□□□□ 0.13
HOXD3-202ENST00000410016 PARP15Q460N3 678 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 C6orf10Q5SRN2 563 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 C6orf52Q5T4I8 152 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 MFSD14CQ5VZR4 134 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 GLB1LQ6UWU2 654 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 HACD2Q6Y1H2 254 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 ZNF354CQ86Y25 554 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CLYBLQ8N0X4 340 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 PEX13Q92968 403 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 C19orf60Q96EN9 201 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 DUS3LQ96G46 650 aaKnown RBP15.89■□□□□ 0.13
HOXD3-202ENST00000410016 PRICKLE1Q96MT3 831 aaPredicted RBP15.89■□□□□ 0.13
HOXD3-202ENST00000410016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.89■□□□□ 0.13
HOXD3-202ENST00000410016 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 SMIM31A0A1B0GVY4 71 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 TCRBV3S1A0A5B6 114 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CCDC162PA2VCL2 907 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 MRASO14807 208 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CD3EAPO15446 510 aaKnown RBP15.89■□□□□ 0.13
HOXD3-202ENST00000410016 TRPA1O75762 1119 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CDK14O94921 469 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 OR6B1O95007 311 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 GLP2RO95838 553 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 EPOP01588 193 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 MAGEA11P43364 429 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 AHI1Q8N157 1196 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 NAT14Q8WUY8 206 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 CNBD2Q96M20 576 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 SLC2A11Q9BYW1 496 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 ARHGAP39Q9C0H5 1083 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 AKTIPQ9H8T0 292 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 MARCH2Q9P0N8 246 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 LZTS1Q9Y250 596 aa15.89■□□□□ 0.13
HOXD3-202ENST00000410016 HTTP42858 3142 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 H3BMM5 538 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 SIX3O95343 332 aaPredicted RBP15.88■□□□□ 0.13
HOXD3-202ENST00000410016 EOMESO95936 686 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 SLC4A1P02730 911 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 ZNF37AP17032 561 aaPredicted RBP15.88■□□□□ 0.13
HOXD3-202ENST00000410016 CLCN2P51788 898 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 OR4D1Q15615 310 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 VARS2Q5ST30 1063 aaKnown RBP15.88■□□□□ 0.13
HOXD3-202ENST00000410016 ISLR2Q6UXK2 745 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 RETREG3Q86VR2 466 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 OR13C4Q8NGS5 318 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 BRSK1Q8TDC3 778 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 BLOC1S5Q8TDH9 187 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 FEM1CQ96JP0 617 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 RPRD1AQ96P16 312 aaPredicted RBP15.88■□□□□ 0.13
HOXD3-202ENST00000410016 POLR1EQ9GZS1 481 aaKnown RBP15.88■□□□□ 0.13
HOXD3-202ENST00000410016 ZNF696Q9H7X3 374 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 ZFYVE28Q9HCC9 887 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 CROTQ9UKG9 612 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 PCDHB5Q9Y5E4 795 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 PLXNA3P51805 1871 aa15.88■□□□□ 0.13
HOXD3-202ENST00000410016 C7orf72A4D263 438 aa15.87■□□□□ 0.13
HOXD3-202ENST00000410016 PRAMEF11O60813 436 aa15.87■□□□□ 0.13
HOXD3-202ENST00000410016 SOAT2O75908 522 aa15.87■□□□□ 0.13
HOXD3-202ENST00000410016 HLA-DPA1P20036 260 aa15.87■□□□□ 0.13
HOXD3-202ENST00000410016 OR1E1P30953 314 aa15.87■□□□□ 0.13
HOXD3-202ENST00000410016 RPL5P46777 297 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms