RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 APOBEC2Q9Y235 224 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 DNAJC16Q9Y2G8 782 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PCDHGC4Q9Y5F7 938 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TARM1B6A8C7 271 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SLCO1B7G3V0H7 640 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF197O14709 1029 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 HGSO14964 777 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 STX7O15400 261 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NDUFS3O75489 264 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 RASSF9O75901 435 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 HSPA4LO95757 839 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PENKP01210 267 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PDHA1P08559 390 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 T-ENOLP0DO92 83 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 KITP10721 976 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NQO1P15559 274 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 EN2P19622 333 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ATP5F1P24539 256 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SERPINB3P29508 390 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SERPINB5P36952 375 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PPARGP37231 505 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NUMBP49757 651 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF140P52738 457 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 EPHB1P54762 984 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 DNAJB13P59910 316 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 BCL2L1Q07817 233 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PLEKHG6Q3KR16 790 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF789Q5FWF6 425 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GPR158Q5T848 1215 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ARMC12Q5T9G4 340 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CES4AQ5XG92 561 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LRRC8EQ6NSJ5 796 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 AFTPHQ6ULP2 937 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TPGS1Q6ZTW0 290 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 MFSD6LQ8IWD5 586 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 APCDD1Q8J025 514 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TTC16Q8NEE8 873 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LPCAT1Q8NF37 534 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 MDGA1Q8NFP4 955 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 OR4K2Q8NGD2 314 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 OR13C4Q8NGS5 318 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SH3RF2Q8TEC5 729 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC22A17Q8WUG5 538 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 HEXDCQ8WVB3 486 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ISG20Q96AZ6 181 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SKA1Q96BD8 255 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 UBXN10Q96LJ8 280 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NSMCE3Q96MG7 304 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 RAB3IPQ96QF0 476 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SORT1Q99523 831 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GATA5Q9BWX5 397 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 DRC3Q9H069 523 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CCDC68Q9H2F9 335 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SUDS3Q9H7L9 328 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SYTL2Q9HCH5 934 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC40A1Q9NP59 571 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TDP1Q9NUW8 608 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 MARCH4Q9P2E8 410 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LHX3Q9UBR4 397 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LNPEPQ9UIQ6 1025 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF638Q14966 1978 aaKnown RBP6.27□□□□□ -1.4
GTF3C3-202ENST00000409364 GREB1Q4ZG55 1949 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CCDC189A1A4V9 331 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 LCHNA4D1U4 455 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 LINC01553A4QN01 128 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 RNF223E7ERA6 249 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 F8W8V4 182 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 H7C0S8 307 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 FCHO1O14526 889 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SLC9A3R1O14745 358 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SCAMP3O14828 347 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 AURKAO14965 403 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 BUD23O43709 281 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 FZD6O60353 706 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 DLX3O60479 287 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 LYPLA1O75608 230 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 MT-CO1P00395 513 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 RHOP08100 348 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SERPINA6P08185 405 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 F7P08709 466 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 POU2F2P09086 479 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SBK3P0C264 359 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PIRTP0C851 137 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CCDC166P0CW27 439 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 ALOX15P16050 662 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 GJA1P17302 382 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CD9P21926 228 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CALB2P22676 271 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PTPN4P29074 926 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SLC8A1P32418 973 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CCR2P41597 374 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 ABL2P42684 1182 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 GRIA4P48058 902 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 GLRBP48167 497 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 TTPAP49638 278 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 STC1P52823 247 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 NAGLUP54802 743 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms