RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 CARD6Q9BX69 1037 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC7A5P2Q9GIP4 190 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 DHX35Q9H5Z1 703 aaKnown RBP9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 LRRC19Q9H756 370 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 PDFQ9HBH1 243 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 UCKL1Q9NWZ5 548 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 TRMT1Q9NXH9 659 aaKnown RBP9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 LHX3Q9UBR4 397 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 DMTF1Q9Y222 760 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 SH3GLB1Q9Y371 365 aa9.77□□□□□ -0.85
NIF3L1-202ENST00000409020 PLXNB3Q9ULL4 1909 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 TMEM247A6NEH6 219 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 POM121BA6NF01 834 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 IGLON5A6NGN9 336 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 WASH4PA8MWX3 477 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 TAF4O00268 1085 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 PIGNO95427 931 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 GSRP00390 522 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 MYF5P13349 255 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 RGRP47804 291 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 CLCN2P51788 898 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 TPI1P60174 286 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 TUBA1BP68363 451 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SEMG2Q02383 582 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SERINC3Q13530 473 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SEPT7Q16181 437 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SMTNL2Q2TAL5 461 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 TXNRD3NBQ6F5E7 133 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 FBXL19Q6PCT2 694 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 DHRS13Q6UX07 377 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 TUBA1AQ71U36 451 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 ARHGAP12Q8IWW6 846 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 UMODL1-AS1Q8N2C9 162 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC25A45Q8N413 288 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 ZCCHC14Q8WYQ9 949 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 NAF1Q96HR8 494 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 PPP1R16AQ96I34 528 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 BMFQ96LC9 184 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 NSMCE3Q96MG7 304 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SMC6Q96SB8 1091 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 CGREF1Q99674 301 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 CDC6Q99741 560 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 CALN1Q9BXU9 219 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC17A9Q9BYT1 436 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC39A8Q9C0K1 460 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 FTSJ1Q9UET6 329 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 HPCAL4Q9UM19 191 aa9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 APOBEC2Q9Y235 224 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-202ENST00000409020 ARID1BQ8NFD5 2236 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 BOLA2-SMG1P6H3BVE0 249 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 EEF2KO00418 725 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 TRIM38O00635 465 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 TNFSF14O43557 240 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 GYPCP04921 128 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 PRKCGP05129 697 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 GZMAP12544 262 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 HNRNPA2B1P22626 353 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ETFBP38117 255 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 RXRGP48443 463 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 UBASH3AP57075 661 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ZNF805Q5CZA5 627 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 CMPK2Q5EBM0 449 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 PPP6R3Q5H9R7 873 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 FIGNQ5HY92 759 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 NEK5Q6P3R8 708 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 GDPD4Q6W3E5 623 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 CCNI2Q6ZMN8 369 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ABI3BPQ7Z7G0 1075 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 IQCHQ86VS3 1027 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ZSWIM9Q86XI8 627 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 CCDC13Q8IYE1 715 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 KIRREL3Q8IZU9 778 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 MDM1Q8TC05 714 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 BCAS4Q8TDM0 211 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 SKA1Q96BD8 255 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ARHGEF26Q96DR7 871 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 KLHDC7BQ96G42 594 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 CNDP2Q96KP4 475 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 KLF6Q99612 283 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 TMUB1Q9BVT8 246 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 THAP2Q9H0W7 228 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ISCUQ9H1K1 167 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ERVMER34-1Q9H9K5 563 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 VCX3AQ9NNX9 186 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 ETNK2Q9NVF9 386 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 IFNKQ9P0W0 207 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 PNMA8BQ9ULN7 279 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 FAM208BQ5VWN6 2430 aa9.75□□□□□ -0.85
NIF3L1-202ENST00000409020 BSNQ9UPA5 3926 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PTPRBP23467 1997 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 A0A087X0T9 212 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 TTC24A2A3L6 582 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 ENC1O14682 589 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 LSM1O15116 133 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 MUSKO15146 869 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 FGF10O15520 208 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms