RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RMI1Q9H9A7 625 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GOLGA6AQ9NYA3 693 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 PKD2L2Q9NZM6 624 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 B4GALT6Q9UBX8 382 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 INTUQ9ULD6 942 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 OR1A2Q9Y585 309 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 PCDHGA7Q9Y5G6 932 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 A0A087X0T9 212 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 PRSS38A1L453 326 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 ERVH48-1M5A8F1 160 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 PLD2O14939 933 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 BUB1BO60566 1050 aaPredicted RBP12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 MPOP05164 745 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TMEM253P0C7T8 217 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 FAM228BP0C875 321 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 CR2P20023 1033 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 PBX1P40424 430 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC25A11Q02978 314 aaKnown RBP12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 C19orf57Q0VDD7 668 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 GALNT2Q10471 571 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 C1orf61Q13536 156 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TRA2AQ13595 282 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 PDK1Q15118 436 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 C3orf38Q5JPI3 329 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 CCNJLQ8IV13 435 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TXLNBQ8N3L3 684 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TEX26Q8N6G2 289 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 CCNYQ8ND76 341 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 EXD1Q8NHP7 514 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 FAM71BQ8TC56 605 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TSACCQ96A04 125 aaPredicted RBP12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 HDAC11Q96DB2 347 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC46A1Q96NT5 459 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 MCCC1Q96RQ3 725 aaPredicted RBP12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 SEMA3CQ99985 751 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TEX101Q9BY14 249 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 EPB41L1Q9H4G0 881 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 CARS2Q9HA77 564 aaKnown RBP12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 CYP4F12Q9HCS2 524 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 TTLL3Q9Y4R7 772 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 RAI2Q9Y5P3 530 aa12.86□□□□□ -0.35
SNORD88B-201ENST00000408454 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 D6RAR5 112 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 GCATO75600 419 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CPNE6O95741 557 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 GYPCP04921 128 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 IVLP07476 585 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CCNB1P14635 433 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CASP14P31944 242 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CETN2P41208 172 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CCDC173Q0VFZ6 552 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 RALGDSQ12967 914 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 TFDP2Q14188 446 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC14A2Q15849 920 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 MAP9Q49MG5 647 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CERCAMQ5T4B2 595 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 ZDHHC20Q5W0Z9 365 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 ALG1LQ6GMV1 187 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 OGFOD3Q6PK18 319 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 ADAMTSL4Q6UY14 1074 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 RAB11FIP2Q7L804 512 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 PIM3Q86V86 326 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 HEATR4Q86WZ0 1026 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 GPR156Q8NFN8 814 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 FUBP1Q96AE4 644 aaKnown RBP12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 CCDC74AQ96AQ1 378 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 AP2M1Q96CW1 435 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 COQ10AQ96MF6 247 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 NOD2Q9HC29 1040 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 RBM22Q9NW64 420 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 SIRPGQ9P1W8 387 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 VPS18Q9P253 973 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 SATB2Q9UPW6 733 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 PCDHGC4Q9Y5F7 938 aa12.85□□□□□ -0.35
SNORD88B-201ENST00000408454 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
SNORD88B-201ENST00000408454 RNF103O00237 685 aa12.84□□□□□ -0.35
SNORD88B-201ENST00000408454 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
SNORD88B-201ENST00000408454 HGSO14964 777 aaPredicted RBP12.84□□□□□ -0.35
SNORD88B-201ENST00000408454 ATXN7O15265 892 aaPredicted RBP12.84□□□□□ -0.35
SNORD88B-201ENST00000408454 KLK10O43240 276 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms