RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 RNF38Q9H0F5 515 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 INTS10Q9NVR2 710 aaKnown RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 ERAP1Q9NZ08 941 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 ACTR3BQ9P1U1 418 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 HMGXB4Q9UGU5 601 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 PIN4Q9Y237 131 aaKnown RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 FAM32AQ9Y421 112 aaKnown RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 ARIH1Q9Y4X5 557 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 LZTS3O60299 673 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 GABBR2O75899 941 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 VTNP04004 478 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 ENO2P09104 434 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 PROZP22891 400 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 GLDCP23378 1020 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 CHRNA5P30532 468 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 L1CAMP32004 1257 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 FBXO47Q5MNV8 452 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 TIGD7Q6NT04 549 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 STRADAQ7RTN6 431 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 PIGZQ86VD9 579 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 CCDC117Q8IWD4 279 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 SMG8Q8ND04 991 aaKnown RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 ENKURQ8TC29 256 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 TWIST2Q8WVJ9 160 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 STARD8Q92502 1023 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 HSFY1Q96LI6 401 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 MUS81Q96NY9 551 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 HGH1Q9BTY7 390 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 TRIM62Q9BVG3 475 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 MRIQ9BWK5 157 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 MAF1Q9H063 256 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 CCNB1IP1Q9NPC3 277 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 SACM1LQ9NTJ5 587 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 RCOR3Q9P2K3 495 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-202ENST00000405010 VWA7Q9Y334 891 aa7.4□□□□□ -1.22
HDAC9-202ENST00000405010 PARP4Q9UKK3 1724 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 SDHDO14521 159 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 BCKDKO14874 412 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 AURKAO14965 403 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 STX7O15400 261 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 PLA2G6O60733 806 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 POLR2EP19388 210 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 CDH5P33151 784 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 SLC26A3P40879 764 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 HLCSP50747 726 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 OLIG2Q13516 323 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 SKIV2LQ15477 1246 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 DPYSL2Q16555 572 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 RBM48Q5RL73 367 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 METTL7BQ6UX53 244 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 GALNT5Q7Z7M9 940 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 KIAA0319LQ8IZA0 1049 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 AADATQ8N5Z0 425 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 EFHBQ8N7U6 833 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 OR2T12Q8NG77 320 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 OR56A4Q8NGH8 313 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 CERKQ8TCT0 537 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 GRIN3AQ8TCU5 1115 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 SLC45A3Q96JT2 553 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 RBM4BQ9BQ04 359 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 FEM1AQ9BSK4 669 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 RBM4Q9BWF3 364 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 KAT8Q9H7Z6 458 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 POLE4Q9NR33 117 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 LATS2Q9NRM7 1088 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 CCM2LQ9NUG4 571 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 KLHL3Q9UH77 587 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 AFF4Q9UHB7 1163 aaKnown RBP7.4□□□□□ -1.23
HDAC9-202ENST00000405010 PRELID1Q9Y255 219 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 TJP1Q07157 1748 aa7.4□□□□□ -1.23
HDAC9-202ENST00000405010 ILVBLA1L0T0 632 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 CCDC162PA2VCL2 907 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-202ENST00000405010 H3BMM5 538 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 CD3EAPO15446 510 aaKnown RBP7.39□□□□□ -1.23
HDAC9-202ENST00000405010 RGS10O43665 173 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 VPS26AO75436 327 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 NPM3O75607 178 aaKnown RBP7.39□□□□□ -1.23
HDAC9-202ENST00000405010 TSPAN9O75954 239 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 PGK2P07205 417 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 GJB1P08034 283 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 GNAO1P09471 354 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 MYF6P23409 242 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 ELK4P28324 431 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 PTPN9P43378 593 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 IDH2P48735 452 aaKnown RBP7.39□□□□□ -1.23
HDAC9-202ENST00000405010 GSK3BP49841 420 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 ZNF132P52740 706 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 IST1P53990 364 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 APOFQ13790 326 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 PDZK1Q5T2W1 519 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
HDAC9-202ENST00000405010 GCNT7Q6ZNI0 430 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 R3HCC1LQ7Z5L2 792 aaKnown RBP7.39□□□□□ -1.23
HDAC9-202ENST00000405010 IGFN1Q86VF2 1251 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 COLGALT2Q8IYK4 626 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 ANKFN1Q8N957 763 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 OLIG1Q8TAK6 271 aa7.39□□□□□ -1.23
HDAC9-202ENST00000405010 ZNF778Q96MU6 729 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms