RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 RNF186Q9NXI6 227 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PCDHB8Q9UN66 801 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 AP4B1Q9Y6B7 739 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ZFP37Q9Y6Q3 630 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 UNC80Q8N2C7 3258 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 FRMPD3Q5JV73 1810 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 A0A087X1B8 175 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 A0A1B0GTL3 188 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TCAF2A6NFQ2 919 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 H3BMM5 538 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 M0QZQ0 153 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CDC7O00311 574 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 OR1I1O60431 355 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 SNAP91O60641 907 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 NIPSNAP2O75323 286 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 STAMBPO95630 424 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 SERPINF2P08697 491 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ALOX15P16050 662 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 RHOQP17081 205 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CKMT2P17540 419 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 EEF1DP29692 281 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 APLP1P51693 650 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CLCN5P51795 746 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PLD1Q13393 1074 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TLR1Q15399 786 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 OR4D1Q15615 310 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TSNQ15631 228 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 DBN1Q16643 649 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PTPRNQ16849 979 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 C18orf21Q32NC0 220 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 SGO1Q5FBB7 561 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 RTP2Q5QGT7 225 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 MAP3K21Q5TCX8 1036 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PGM2L1Q6PCE3 622 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PAQR3Q6TCH7 311 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 GLT6D1Q7Z4J2 308 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 RAB44Q7Z6P3 723 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 SAPCD2Q86UD0 394 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 LILRA2Q8N149 483 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CARNMT1Q8N4J0 409 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 DNAJB14Q8TBM8 379 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 SPPL2BQ8TCT7 592 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CALML6Q8TD86 181 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 LINC01599Q8WXQ3 324 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 AUTS2Q8WXX7 1259 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 VPS33AQ96AX1 596 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TSPAN17Q96FV3 270 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 IMP4Q96G21 291 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 ANKRD27Q96NW4 1050 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TSGA13Q96PP4 275 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PHF12Q96QT6 1004 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ACOX2Q99424 681 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 GPR21Q99679 349 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TRIM62Q9BVG3 475 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 POLR1EQ9GZS1 481 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 FBXO44Q9H4M3 255 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 EML4Q9HC35 981 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 ZBTB26Q9HCK0 441 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ATP13A1Q9HD20 1204 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TLR8Q9NR97 1041 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 TREX1Q9NSU2 369 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CATSPERZQ9NTU4 200 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 GALPQ9UBC7 116 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 VTI1BQ9UEU0 232 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 STK39Q9UEW8 545 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 AFF4Q9UHB7 1163 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 TLR6Q9Y2C9 796 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 SPO11Q9Y5K1 396 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 E5RI56 91 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 AP3B1O00203 1094 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 KIF3CO14782 793 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PQBP1O60828 265 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 RNASEH2AO75792 299 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 S1PR4O95977 384 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 IGLV3-25P01717 112 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CYP11A1P05108 521 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 RHOCP08134 193 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 MMP2P08253 660 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 HGFP14210 728 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 NCK1P16333 377 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 TACR2P21452 398 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 PRDX3P30048 256 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 GKP32189 559 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CYP2C18P33260 490 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 SGSHP51688 502 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ACLYP53396 1101 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CDKL1Q00532 357 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 CREB5Q02930 508 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 HNRNPDQ14103 355 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 NFE2Q16621 373 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 ZNF423Q2M1K9 1284 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ATXN7L2Q5T6C5 722 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 NADSYN1Q6IA69 706 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 MRNIPQ6NTE8 343 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 AAGABQ6PD74 315 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 DNAJC14Q6Y2X3 702 aaPredicted RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 SLC24A5Q71RS6 500 aa4.36□□□□□ -1.71
SMC6-203ENST00000402989 MRPL10Q7Z7H8 261 aaKnown RBP4.36□□□□□ -1.71
SMC6-203ENST00000402989 RNF180Q86T96 592 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms