RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FKBPLQ9UIM3 349 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 STX7O15400 261 aaKnown RBP25.64■■□□□ 1.7
CPNE1-205ENST00000401607 BNIP3LO60238 219 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 NEFHP12036 1026 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 PCLAFQ15004 111 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 GAB4Q2WGN9 574 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 CCDC153Q494R4 210 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 Q6ZVU0 165 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 ETFBKMTQ8IXQ9 262 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 TDHQ8IZJ6 230 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 CYB5D2Q8WUJ1 264 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 ECHDC3Q96DC8 303 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 BPIFA1Q9NP55 256 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 IL17CQ9P0M4 197 aa25.64■■□□□ 1.7
CPNE1-205ENST00000401607 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-205ENST00000401607 KIF26AQ9ULI4 1882 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-205ENST00000401607 NFATC1O95644 943 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 CRABP2P29373 138 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 BMP8BP34820 402 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 ITIH4Q14624 930 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 DBN1Q16643 649 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 FASTKD1Q53R41 847 aaKnown RBP25.64■■□□□ 1.69
CPNE1-205ENST00000401607 HECTD2Q5U5R9 776 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 TRIM42Q8IWZ5 723 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 CENPLQ8N0S6 344 aaPredicted RBP25.64■■□□□ 1.69
CPNE1-205ENST00000401607 E2F7Q96AV8 911 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 FAM83CQ9BQN1 747 aa25.64■■□□□ 1.69
CPNE1-205ENST00000401607 CPEB1Q9BZB8 566 aaKnown RBP25.64■■□□□ 1.69
CPNE1-205ENST00000401607 USP15Q9Y4E8 981 aaPredicted RBP25.64■■□□□ 1.69
CPNE1-205ENST00000401607 OTOL1A6NHN0 477 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-205ENST00000401607 TULP3O75386 442 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 SP100P23497 879 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-205ENST00000401607 ALDH3A1P30838 453 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 STC1P52823 247 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 CHI3L2Q15782 390 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 CDKN3Q16667 212 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 TANGO2Q6ICL3 276 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 CHST14Q8NCH0 376 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 FRS2Q8WU20 508 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 KCTD4Q8WVF5 259 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 GPR63Q9BZJ6 419 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 CDH7Q9ULB5 785 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 ACOT9Q9Y305 439 aa25.63■■□□□ 1.69
CPNE1-205ENST00000401607 H7C0S8 307 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 POP4O95707 220 aaKnown RBP25.62■■□□□ 1.69
CPNE1-205ENST00000401607 COL6A2P12110 1019 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 HNF1BP35680 557 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 HMGCLP35914 325 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 PEX6Q13608 980 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 ZNF549Q6P9A3 640 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 SDCCAG8Q86SQ7 713 aaPredicted RBP25.62■■□□□ 1.69
CPNE1-205ENST00000401607 LCA5Q86VQ0 697 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 SPATS2Q86XZ4 545 aaKnown RBP25.62■■□□□ 1.69
CPNE1-205ENST00000401607 OR2A12Q8NGT7 310 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 RAB3IL1Q8TBN0 382 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 TSSK1BQ9BXA7 367 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 SUV39H2Q9H5I1 410 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 ZDHHC6Q9H6R6 413 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 COPG2Q9UBF2 871 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 SLC27A6Q9Y2P4 619 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 CRYL1Q9Y2S2 319 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 COL4A3Q01955 1670 aa25.62■■□□□ 1.69
CPNE1-205ENST00000401607 CAPN8A6NHC0 703 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 MC4RP32245 332 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 SLC12A2P55011 1212 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 BST1Q10588 318 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 DLG1Q12959 904 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 VITQ6UXI7 678 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 SPNS2Q8IVW8 549 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 PLPP6Q8IY26 295 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 WFIKKN2Q8TEU8 576 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 NMRAL1Q9HBL8 299 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 HPS4Q9NQG7 708 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 WASH3PC4AMC7 463 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 IL1BP01584 269 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 KCNA4P22459 653 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 CDKN1CP49918 316 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-205ENST00000401607 XIAPP98170 497 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 MESP2Q0VG99 397 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 PTPRNQ16849 979 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 GLIPR1L2Q4G1C9 344 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 TNS4Q8IZW8 715 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 PAF1Q8N7H5 531 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 CIPCQ9C0C6 399 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 INTS10Q9NVR2 710 aaKnown RBP25.61■■□□□ 1.69
CPNE1-205ENST00000401607 VWA7Q9Y334 891 aa25.61■■□□□ 1.69
CPNE1-205ENST00000401607 A0A087X1B8 175 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 TTC34A8MYJ7 566 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 DNAJC6O75061 913 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 WISP3O95389 354 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 FGF3P11487 239 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 SLC6A11P48066 632 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 VASPP50552 380 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-205ENST00000401607 CDKN2DP55273 166 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 ADAM15Q13444 863 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 FAM45BPQ6NSW5 357 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 PSAPL1Q6NUJ1 521 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 C10orf107Q8IVU9 208 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 TMEM151AQ8N4L1 468 aa25.6■■□□□ 1.69
CPNE1-205ENST00000401607 ANKS4BQ8N8V4 417 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms