RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 FZD1Q9UP38 647 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SLC22A14Q9Y267 594 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TDRKHQ9Y2W6 561 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CHD8Q9HCK8 2581 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ARAP2Q8WZ64 1704 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TRBC2A0A5B9 178 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 WDR91A4D1P6 747 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CLCA1A8K7I4 914 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PDLIM1O00151 329 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PCDH8O95206 1070 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MATN4O95460 622 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 DDAH2O95865 285 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 B3GALT4O96024 378 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MT-ND5P03915 603 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 UQCRFS1P1P0C7P4 283 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 DDX5P17844 614 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ERCC2P18074 760 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CYP2B6P20813 491 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GPTP24298 496 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ITGB8P26012 769 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PTX3P26022 381 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GABRB3P28472 473 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ICAM3P32942 547 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TRHRP34981 398 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SREBF1P36956 1147 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CDKN1BP46527 198 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 HSPA13P48723 471 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 FNTBP49356 437 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RIPK4P57078 832 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NKX6-1P78426 367 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 XIAPP98170 497 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SPIBQ01892 262 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GCNT1Q02742 428 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SRSF11Q05519 484 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CYP4F3Q08477 520 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TBL3Q12788 808 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SCGB2A2Q13296 93 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PCLAFQ15004 111 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PON2Q15165 354 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NONOQ15233 471 aaKnown RBP eCLIP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 FIGNQ5HY92 759 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 STRIP1Q5VSL9 837 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PMF1Q6P1K2 205 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PIK3AP1Q6ZUJ8 805 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CHSY3Q70JA7 882 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF365Q70YC5 407 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CHST9Q7L1S5 443 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KANSL1Q7Z3B3 1105 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CDKL3Q8IVW4 592 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CRYBG2Q8N1P7 616 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SLC15A4Q8N697 577 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ENDOVQ8N8Q3 282 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RBM15BQ8NDT2 890 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SPATA4Q8NEY3 305 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 OR52E1Q8NGJ3 308 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 LRRC8CQ8TDW0 803 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SCFD1Q8WVM8 642 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GLMPQ8WWB7 406 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GFM2Q969S9 779 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 C3orf49Q96BT1 292 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PLPPR2Q96GM1 343 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ZDHHC12Q96GR4 267 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RCC1LQ96I51 464 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TMEM68Q96MH6 324 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TRNT1Q96Q11 434 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RBM15Q96T37 977 aaKnown RBP eCLIP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PKP2Q99959 881 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MGME1Q9BQP7 344 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 BOCQ9BWV1 1114 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TLR10Q9BXR5 811 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GON7Q9BXV9 100 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KRTAP4-5Q9BYR2 181 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TRIM54Q9BYV2 358 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MAGEB5Q9BZ81 275 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TRIM4Q9C037 500 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KLC2Q9H0B6 622 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 C12orf65Q9H3J6 166 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PCIF1Q9H4Z3 704 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 FAM212BQ9NTI7 297 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 VPS54Q9P1Q0 977 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 DNAJB11Q9UBS4 358 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF70Q9UC06 446 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 LIMA1Q9UHB6 759 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PAIP2BQ9ULR5 123 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ANGEL1Q9UNK9 670 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PPIEQ9UNP9 301 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PCDHB2Q9Y5E7 798 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 COPG1Q9Y678 874 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KCNE2Q9Y6J6 123 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF318Q5VUA4 2279 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 A0A1B0GUL7 405 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 SPDYE3A6NKU9 549 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 H3BQV1 296 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 TSPAN4O14817 238 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF185O15231 689 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 LRRTM2O43300 516 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 DNPH1O43598 174 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 LILRA1O75019 489 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 TADA2AO75478 443 aa3.94□□□□□ -1.78
CLHC1-201ENST00000401408 CDC123O75794 336 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms