RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 NXNL1Q96CM4 212 aa13.19□□□□□ -0.3
ITSN1-208ENST00000399349 C19orf60Q96EN9 201 aa13.19□□□□□ -0.3
ITSN1-208ENST00000399349 NARS2Q96I59 477 aaKnown RBP13.19□□□□□ -0.3
ITSN1-208ENST00000399349 KCNE2Q9Y6J6 123 aa13.19□□□□□ -0.3
ITSN1-208ENST00000399349 TSHRP16473 764 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 MAGP20916 626 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RNASEH2BQ5TBB1 312 aaKnown RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 PMF1Q6P1K2 205 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 C15orf52Q6ZUT6 534 aaKnown RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RBM15BQ8NDT2 890 aaKnown RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 GSTK1Q9Y2Q3 226 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 PLLPQ9Y342 182 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 NRP2O60462 931 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 STX11O75558 287 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 BUD31P41223 144 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RTP1P59025 263 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 SPIBQ01892 262 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 DEF8Q6ZN54 512 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RALGPS2Q86X27 583 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RASAL3Q86YV0 1011 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 SLC44A1Q8WWI5 657 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 PPP1R16AQ96I34 528 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 COQ7Q99807 217 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 NPEPPSL1A6NEC2 478 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 SLC22A3O75751 556 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 GABRR2P28476 465 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 NR1H2P55055 460 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 EPS8Q12929 822 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 KLF10Q13118 480 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 NR1D2Q14995 579 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 USP50Q70EL3 339 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 MON1AQ86VX9 555 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 CHPFQ8IZ52 775 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 CXorf40BQ96DE9 158 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 TCF12Q99081 682 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 SLITRK2Q9H156 845 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 MKL2Q9ULH7 1088 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 GSC2O15499 205 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RHAGQ02094 409 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 ILF2Q12905 390 aaKnown RBP13.18□□□□□ -0.3
ITSN1-208ENST00000399349 MED22Q15528 200 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 GPR158Q5T848 1215 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 LINGO4Q6UY18 593 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 RASGEF1CQ8N431 466 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 APOLD1Q96LR9 279 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 GPR20Q99678 358 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 PTGFRNQ9P2B2 879 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
ITSN1-208ENST00000399349 TAF4O00268 1085 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 ADCY6O43306 1168 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 FGF1P05230 155 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 PRG2P13727 222 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 CREB1P16220 341 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 TLX1P31314 330 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 PURAQ00577 322 aaKnown RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 RFX4Q33E94 735 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 CLEC6AQ6EIG7 209 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 OR10G6Q8NH81 332 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 ADGRB2O60241 1585 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 A0A088AWK7 358 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 ZNF10P21506 573 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 ATP6V0D1P61421 351 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 MPP1Q00013 466 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 DCLRE1AQ6PJP8 1040 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 RMI1Q9H9A7 625 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 MAP10Q9P2G4 905 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 FAM149AA5PLN7 773 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 CILPO75339 1184 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 CTNNB1P35222 781 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 FAM124AQ86V42 546 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 SPPL2CQ8IUH8 684 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 HJURPQ8NCD3 748 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 CD101Q93033 1021 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 C1QTNF7Q9BXJ2 289 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 RASSF1Q9NS23 344 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 CNOT6Q9ULM6 557 aaKnown RBP13.17□□□□□ -0.3
ITSN1-208ENST00000399349 SNX10Q9Y5X0 201 aa13.17□□□□□ -0.3
ITSN1-208ENST00000399349 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms