RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ITGB6P18564 788 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CAPGP40121 348 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 LILRA4P59901 499 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PRKG2Q13237 762 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TUBB3Q13509 450 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SNX17Q15036 470 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FAM45BPQ6NSW5 357 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CRTC3Q6UUV7 619 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ERMP1Q7Z2K6 904 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HEATR4Q86WZ0 1026 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 METTL25Q8N6Q8 603 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FAM45AQ8TCE6 357 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TRPM4Q8TD43 1214 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GAB3Q8WWW8 586 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TBATAQ96M53 351 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TEPSINQ96N21 525 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 AKTIPQ9H8T0 292 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PALMDQ9NP74 551 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MYBPHLA2RUH7 354 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PFKMP08237 780 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 IDO1P14902 403 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CXCR3P49682 368 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CCT8P50990 548 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 INHBCP55103 352 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DMC1Q14565 340 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ARHGAP36Q6ZRI8 547 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MILR1Q7Z6M3 343 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CEP97Q8IW35 865 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 EID3Q8N140 333 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FAM120BQ96EK7 910 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PLEKHA8Q96JA3 519 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CHID1Q9BWS9 393 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HIPK3Q9H422 1215 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 POLG2Q9UHN1 485 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FBXW11Q9UKB1 542 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 EIF3LQ9Y262 564 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ZCWPW2A0A1B0GU75 182 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TCAF2A6NFQ2 919 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CST1P01037 141 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DAOAP59103 153 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SULT2A1Q06520 285 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PAFAH1B3Q15102 231 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PAGE2BQ5JRK9 111 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RNF111Q6ZNA4 994 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FIBCD1Q8N539 461 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ATG16L2Q8NAA4 619 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 OR56A4Q8NGH8 313 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SPPL2BQ8TCT7 592 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HPS1Q92902 700 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ROPN1LQ96C74 230 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SNX27Q96L92 541 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HNRNPABQ99729 332 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 UGT2B28Q9BY64 529 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 EXOSC4Q9NPD3 245 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GMEB1Q9Y692 573 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SOCS2O14508 198 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PAGE1O75459 146 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SLC22A3O75751 556 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 KRT75O95678 551 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MAGP20916 626 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ALDH4A1P30038 563 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TUBA4AP68366 448 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NRG1Q02297 640 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GRIN3AQ8TCU5 1115 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DPY30Q9C005 99 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 C6orf62Q9GZU0 229 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 IFT80Q9P2H3 777 aaPredicted RBP11.12□□□□□ -0.63
CSGALNACT1-202ENST00000397998 C7orf72A4D263 438 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ARPC2O15144 300 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RAMP2O60895 175 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NADKO95544 446 aaPredicted RBP11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GPIP06744 558 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SMIM18P0DKX4 95 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GHRHRQ02643 423 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GRM2Q14416 872 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ACAP2Q15057 778 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RABL3Q5HYI8 236 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CCNYL2Q5T2Q4 361 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ABI1Q8IZP0 508 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 C12orf42Q96LP6 360 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SEMA3CQ99985 751 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 EPB41L1Q9H4G0 881 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 WWOXQ9NZC7 414 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PCDHGB4Q9UN71 923 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PCDHGB5Q9Y5G0 923 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 A0A1B0GTW7 788 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
CSGALNACT1-202ENST00000397998 C2orf81A6NN90 581 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms