RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 CENPAP49450 140 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 CRADDP78560 199 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PON2Q15165 354 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PITRM1Q5JRX3 1037 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 USP7Q93009 1102 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 TCP11X1B4DZS4 312 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PTGESO14684 152 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 SNAP91O60641 907 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 TRIM13O60858 407 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 CCDC166P0CW27 439 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 CCR4P51679 360 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 INPP5AQ14642 412 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MS4A13Q5J8X5 152 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PLD5Q8N7P1 536 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 OR2W6PQ8NHA6 318 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 NAF1Q96HR8 494 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 TMEM237Q96Q45 408 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 IRF2BPLQ9H1B7 796 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 FBRSQ9HAH7 460 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MAPRE3Q9UPY8 281 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 INVSQ9Y283 1065 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 C5P01031 1676 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 ENO2P09104 434 aaPredicted RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 LPAL2Q16609 132 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 CYP51A1Q16850 503 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 SLC36A4Q6YBV0 504 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 CHSY3Q70JA7 882 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 UBE2R2Q712K3 238 aaPredicted RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 ATOH1Q92858 354 aaPredicted RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 FGF13Q92913 245 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 FAM162AQ96A26 154 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 SH3GL1Q99961 368 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 UPK3BL1B0FP48 263 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 UPK3BL2E5RIL1 263 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 CLDN4O14493 209 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 PPP1R37O75864 691 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 KLK3P07288 261 aaPredicted RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 CDH2P19022 906 aaPredicted RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 AGXTP21549 392 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 PLK1P53350 603 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 OCA2Q04671 838 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 MYLK3Q32MK0 819 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 XKR6Q5GH73 641 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 SLC35F5Q8WV83 523 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 RABGEF1Q9UJ41 708 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 RGS14O43566 566 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 VARSP26640 1264 aaKnown RBP12.86□□□□□ -0.35
CAST-206ENST00000395812 RING1Q06587 406 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 TDGQ13569 410 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 C1orf146Q5VVC0 180 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 FAM129CQ86XR2 697 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 LMLNQ96KR4 655 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 KCNF1Q9H3M0 494 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 FZD10Q9ULW2 581 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 AK5Q9Y6K8 562 aa12.86□□□□□ -0.35
CAST-206ENST00000395812 ACP5P13686 325 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 NAA20P61599 178 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 MED21Q13503 144 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 ELAVL3Q14576 367 aaKnown RBP12.85□□□□□ -0.35
CAST-206ENST00000395812 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 AGBL2Q5U5Z8 902 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 RASIP1Q5U651 963 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 SIX5Q8N196 739 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 OR10T2Q8NGX3 314 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 LRRN4Q8WUT4 740 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 RAB7BQ96AH8 199 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 SLC22A18Q96BI1 424 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 OR2AG1Q9H205 316 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 NPHS2Q9NP85 383 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 STOML1Q9UBI4 398 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 SOX13Q9UN79 622 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 FAM155AB1AL88 458 aaPredicted RBP12.85□□□□□ -0.35
CAST-206ENST00000395812 AXIN1O15169 862 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 HPCAL1P37235 193 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 DPP6P42658 865 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 STX4Q12846 297 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 DNAJC3Q13217 504 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 CASD1Q96PB1 797 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 TPSD1Q9BZJ3 242 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 ALG9Q9H6U8 611 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 VRTNQ9H8Y1 702 aa12.85□□□□□ -0.35
CAST-206ENST00000395812 KRCC1Q9NPI7 259 aaPredicted RBP12.85□□□□□ -0.35
CAST-206ENST00000395812 PSMD13Q9UNM6 376 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms