RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DPPA4Q7L190 304 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 SLFN11Q7Z7L1 901 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 SRLQ86TD4 932 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 NAGSQ8N159 534 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 BMPERQ8N8U9 685 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 OR4D9Q8NGE8 314 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 SLC30A5Q8TAD4 765 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 MIB2Q96AX9 1013 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 NSMCE3Q96MG7 304 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 GSDMCQ9BYG8 508 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 SPRY4Q9C004 299 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 NDST4Q9H3R1 872 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 LRRC19Q9H756 370 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 PILRAQ9UKJ1 303 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 CREBBPQ92793 2442 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 ZNF106Q9H2Y7 1883 aaKnown RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 LOC101059948A0A1B0GTJ6 334 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 A8MX80 341 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 F8VZ95 297 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 PRAMEF11O60813 436 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 GADD45BO75293 160 aaPredicted RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 MYCLP1P12525 358 aaPredicted RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 CHRNB2P17787 502 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 SERPINA4P29622 427 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 CSTF2P33240 577 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNCA-205ENST00000394991 RFC1P35251 1148 aaPredicted RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 ANP32AP39687 249 aaKnown RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 FMO1Q01740 532 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 ILF3Q12906 894 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNCA-205ENST00000394991 PTP4A2Q12974 167 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 SLC30A9Q6PML9 568 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 TSEN2Q8NCE0 465 aaKnown RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 CCDC112Q8NEF3 446 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 ABHD17AQ96GS6 310 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 COQ10AQ96MF6 247 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 FRMD8Q9BZ67 464 aaPredicted RBP15.83■□□□□ 0.12
SNCA-205ENST00000394991 ATP13A3Q9H7F0 1226 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 CACNA1DQ01668 2161 aa15.83■□□□□ 0.12
SNCA-205ENST00000394991 EFCAB7A8K855 629 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 B4E171 279 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 MTSS1O43312 755 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 CREB3O43889 395 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 UCHL3P15374 230 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 TSPAN7P41732 249 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 GNPDA1P46926 289 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 CSNK1DP48730 415 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 SQSTM1Q13501 440 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 ACOX1Q15067 660 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 VWA3BQ502W6 1294 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 ATP1A1-AS1Q5TC04 95 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 TIPARPQ7Z3E1 657 aaKnown RBP15.82■□□□□ 0.12
SNCA-205ENST00000394991 HEATR4Q86WZ0 1026 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 FAM129CQ86XR2 697 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 UNC5BQ8IZJ1 945 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 RTP4Q96DX8 246 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 CELF6Q96J87 481 aaKnown RBP15.82■□□□□ 0.12
SNCA-205ENST00000394991 TEX101Q9BY14 249 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 ASPSCR1Q9BZE9 553 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 GPN2Q9H9Y4 310 aaPredicted RBP15.82■□□□□ 0.12
SNCA-205ENST00000394991 TRNAU1APQ9NX07 287 aaKnown RBP15.82■□□□□ 0.12
SNCA-205ENST00000394991 SUFUQ9UMX1 484 aa15.82■□□□□ 0.12
SNCA-205ENST00000394991 PDE2AO00408 941 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 TRAFD1O14545 582 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 CAPN5O15484 640 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 CCP110O43303 1012 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 NR1D1P20393 614 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 GPD1P21695 349 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 CD97P48960 835 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 CTBSQ01459 385 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 ITPR2Q14571 2701 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 DEFB109BQ30KR1 87 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 LACTB2Q53H82 288 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 DCAF12Q5T6F0 453 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 WDR59Q6PJI9 974 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 ZNF761Q86XN6 746 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 NRSN1Q8IZ57 195 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 NLGN4XQ8N0W4 816 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 TNRC6AQ8NDV7 1962 aaKnown RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 NLGN4YQ8NFZ3 816 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 NUS1Q96E22 293 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 STK33Q9BYT3 514 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 CATSPERBQ9H7T0 1116 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 PHPT1Q9NRX4 125 aaPredicted RBP15.81■□□□□ 0.12
SNCA-205ENST00000394991 B4GALT6Q9UBX8 382 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 FZD10Q9ULW2 581 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 PLEKHM1Q9Y4G2 1056 aa15.81■□□□□ 0.12
SNCA-205ENST00000394991 PRR19A6NJB7 356 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 K7EM74 188 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 ZW10O43264 779 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 KRT3P12035 628 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 PRKCSHP14314 528 aaPredicted RBP15.8■□□□□ 0.12
SNCA-205ENST00000394991 ADCY8P40145 1251 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 POLD2P49005 469 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 GSCP56915 257 aaPredicted RBP15.8■□□□□ 0.12
SNCA-205ENST00000394991 RAB15P59190 212 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 CDR2Q01850 454 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 BCL2L1Q07817 233 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 BIRC2Q13490 618 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 CNGA3Q16281 694 aa15.8■□□□□ 0.12
SNCA-205ENST00000394991 HSP90AA4PQ58FG1 418 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms