RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ARHGAP36Q6ZRI8 547 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 TRIM11Q96F44 468 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 NSMCE3Q96MG7 304 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 NUDCD1Q96RS6 583 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 CYP4F12Q9HCS2 524 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 MRPL40Q9NQ50 206 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 PHPT1Q9NRX4 125 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 SEPT10Q9P0V9 454 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 B4GALT6Q9UBX8 382 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 PHTF1Q9UMS5 762 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 A0A1W2PQC6 194 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 H3BRJ5 948 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 CPNE6O95741 557 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 VIPR1P32241 457 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 GPR3P46089 330 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 ACOX1Q15067 660 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 TCEA2Q15560 299 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 DTX1Q86Y01 620 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 JAMLQ86YT9 394 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 BBS5Q8N3I7 341 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 PAF1Q8N7H5 531 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 NUS1Q96E22 293 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 SGF29Q96ES7 293 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 DTD2Q96FN9 168 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 MGME1Q9BQP7 344 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 BPIFA3Q9BQP9 254 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 GSDMCQ9BYG8 508 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 FRMD8Q9BZ67 464 aaPredicted RBP17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 HAUS4Q9H6D7 363 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 CNOT8Q9UFF9 292 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 PISDQ9UG56 409 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 PPIL1Q9Y3C6 166 aa17.5■□□□□ 0.39
SNRPA1-202ENST00000394082 LRRC53A6NM62 1247 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 HGSO14964 777 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ATMINO43313 823 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ZIC2O95409 532 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 CEACAM5P06731 702 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 HGFP14210 728 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ARL4AP40617 200 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 DPTQ07507 201 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ILF3Q12906 894 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 SQSTM1Q13501 440 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ZNF235Q14590 738 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 CNGA3Q16281 694 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ZNF571Q7Z3V5 609 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 PIM3Q86V86 326 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 LRRC49Q8IUZ0 686 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 PELI3Q8N2H9 469 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 Q8N9G6 341 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 CCL4L1Q8NHW4 92 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 SCRN2Q96FV2 425 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 MCCC1Q96RQ3 725 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 TRIM7Q9C029 511 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ISCUQ9H1K1 167 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 AKAP7Q9P0M2 348 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 SLC17A4Q9Y2C5 497 aa17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 ARHGEF17Q96PE2 2063 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-202ENST00000394082 B4DGG1 531 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 TEX33O43247 280 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 B4GAT1O43505 415 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 MAFKO60675 156 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 FGF1P05230 155 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 CYP2A6P11509 494 aaPredicted RBP17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 CDH6P55285 790 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 CDK3Q00526 305 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 ASIC2Q16515 512 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 TMEM164Q5U3C3 297 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 TMCO3Q6UWJ1 677 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 USP53Q70EK8 1073 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 POLNQ7Z5Q5 900 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 NLRP8Q86W28 1048 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 HEATR4Q86WZ0 1026 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 NRROSQ86YC3 692 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 SCARF2Q96GP6 870 aaPredicted RBP17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 CARS2Q9HA77 564 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 SPATS2LQ9NUQ6 558 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 PCDHB11Q9Y5F2 797 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 PCDHGC4Q9Y5F7 938 aa17.48■□□□□ 0.39
SNRPA1-202ENST00000394082 PRAMEF33A0A0G2JMD5 474 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 DDX3XO00571 662 aaKnown RBP eCLIP17.47■□□□□ 0.392e-19■■■□□ 18.1
SNRPA1-202ENST00000394082 PRAMEF10O60809 474 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 CPP00450 1065 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 FUCA1P04066 466 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 IVLP07476 585 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 SFTPCP11686 197 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 ITIH1P19827 911 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 SERPINB6P35237 376 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 TRA2AQ13595 282 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 PIGHQ14442 188 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 TGIF1Q15583 401 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 CCDC183Q5T5S1 534 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 TMPRSS9Q7Z410 1059 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 SFTPA2Q8IWL1 248 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms