RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 LDLRP01130 860 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CYP2C9P11712 490 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CAPGP40121 348 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 BTBD8Q5XKL5 378 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 AFAP1L2Q8N4X5 818 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 FIG4Q92562 907 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 C19orf60Q96EN9 201 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 GJD4Q96KN9 370 aaPredicted RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CHID1Q9BWS9 393 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 IL22Q9GZX6 179 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 EHD1Q9H4M9 534 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 INTS7Q9NVH2 962 aaKnown RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 FBXO5Q9UKT4 447 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ERGIC3Q9Y282 383 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 FAM32AQ9Y421 112 aaKnown RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 NADKO95544 446 aaPredicted RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 DLGAP3O95886 979 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 TCF3P15923 654 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ATP5F1P24539 256 aaPredicted RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 TKTL1P51854 596 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 PLA2G16P53816 162 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 LIPEQ05469 1076 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CDH17Q12864 832 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CYBRD1Q53TN4 286 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 SLC26A9Q7LBE3 791 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CENPNQ96H22 339 aaPredicted RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ZNF385DQ9H6B1 395 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ATAD3AQ9NVI7 634 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 UTS2RQ9UKP6 389 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ADAM28Q9UKQ2 775 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 BAG5Q9UL15 447 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 SLCO1B7G3V0H7 640 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 CLPXO76031 633 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 IPO13O94829 963 aaKnown RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ADAM17P78536 824 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 AQP6Q13520 282 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 FRG1Q14331 258 aaKnown RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 SLC36A3Q495N2 470 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 C4orf22Q6V702 233 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 ARMCX6Q7L4S7 300 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 FUNDC2Q9BWH2 189 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
PHTF1-205ENST00000393357 PLEKHA5Q9HAU0 1116 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 KCTD3Q9Y597 815 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 YJEFN3A6XGL0 299 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 A8MV72 311 aaPredicted RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 MYF6P23409 242 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 MATKP42679 507 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 INAQ16352 499 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 PIWIL4Q7Z3Z4 852 aaKnown RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 MILR1Q7Z6M3 343 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 ADCK1Q86TW2 530 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 SLC22A16Q86VW1 577 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 ERO1BQ86YB8 467 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 RSPH1Q8WYR4 309 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 C2orf40Q9H1Z8 148 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 SMARCAD1Q9H4L7 1026 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 NANOGQ9H9S0 305 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 CYP3A43Q9HB55 503 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 CCM2LQ9NUG4 571 aaPredicted RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 GIN1Q9NXP7 522 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 IPO11Q9UI26 975 aaKnown RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 COMMD10Q9Y6G5 202 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 UBA6A0AVT1 1052 aaPredicted RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 PSMB9P28065 219 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 CD151P48509 253 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 GSK3BP49841 420 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 BST2Q10589 180 aaKnown RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 NIPAL1Q6NVV3 410 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 SPESP1Q6UW49 350 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 GADL1Q6ZQY3 521 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 PTGR2Q8N8N7 351 aaPredicted RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 MYOCQ99972 504 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 ULBP1Q9BZM6 244 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 CCDC68Q9H2F9 335 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 FZD8Q9H461 694 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 TMEM181Q9P2C4 612 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 FAM50BQ9Y247 325 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 LAMA2P24043 3122 aaKnown RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 SCN1AP35498 2009 aa16.37■□□□□ 0.21
PHTF1-205ENST00000393357 ZFC3H1O60293 1989 aaKnown RBP16.37■□□□□ 0.21
PHTF1-205ENST00000393357 UBXN8O00124 270 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 APOA4P06727 396 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 HSPA1AP0DMV8 641 aaKnown RBP16.36■□□□□ 0.21
PHTF1-205ENST00000393357 HSPA1BP0DMV9 641 aaKnown RBP16.36■□□□□ 0.21
PHTF1-205ENST00000393357 MAP2K4P45985 399 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 MCCD1P59942 119 aaPredicted RBP16.36■□□□□ 0.21
PHTF1-205ENST00000393357 IFITM3Q01628 133 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 NRBF2Q96F24 287 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 TKTL2Q9H0I9 626 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 NXF3Q9H4D5 531 aaKnown RBP16.36■□□□□ 0.21
PHTF1-205ENST00000393357 OR12D3Q9UGF7 316 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 CD300AQ9UGN4 299 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 TCAF1Q9Y4C2 921 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 CPQQ9Y646 472 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 SOWAHBA6NEL2 793 aa16.36■□□□□ 0.21
PHTF1-205ENST00000393357 GOLGA8CPA6NN73 597 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms