RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SLC2A14Q8TDB8 520 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 C12orf42Q96LP6 360 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 SNTG2Q9NY99 539 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 FAM155BO75949 473 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 ANGPTL1O95841 491 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 SLC7A1P30825 629 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 HPCAL1P37235 193 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 TIGD2Q4W5G0 525 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 LDLRAP1Q5SW96 308 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 FAM126AQ9BYI3 521 aaPredicted RBP19.72■□□□□ 0.75
SHANK1-203ENST00000391813 PCDH18Q9HCL0 1135 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 PTBP2Q9UKA9 531 aaKnown RBP19.72■□□□□ 0.75
SHANK1-203ENST00000391813 PPM1HQ9ULR3 514 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 PDE10AQ9Y233 779 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 CCDC189A1A4V9 331 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 GNRH1P01148 92 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 SNHG28P0DPA3 235 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 MAGEA8P43361 318 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 FBXW4P57775 412 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 SEZ6LQ9BYH1 1024 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 KLHL1Q9NR64 748 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 KCNU1A8MYU2 1149 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 H3BMM5 538 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 ELP6Q0PNE2 266 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 CAMK2GQ13555 558 aaPredicted RBP19.71■□□□□ 0.75
SHANK1-203ENST00000391813 CDH18Q13634 790 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 CAMKK1Q8N5S9 505 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 TMEM9Q9P0T7 183 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 KLQ9UEF7 1012 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 FSTL1Q12841 308 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 UXS1Q8NBZ7 420 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 SLC47A1Q96FL8 570 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 FAM240BA0A1B0GVZ2 78 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 E7ENX8 843 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 RNASEH1O60930 286 aaKnown RBP19.71■□□□□ 0.75
SHANK1-203ENST00000391813 ULK1O75385 1050 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 LYPLA2O95372 231 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 LIMK2P53671 638 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 MRPS6P82932 125 aaKnown RBP19.71■□□□□ 0.75
SHANK1-203ENST00000391813 SCN1BQ07699 218 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 HERC3Q15034 1050 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 LSM12Q3MHD2 195 aaKnown RBP19.71■□□□□ 0.75
SHANK1-203ENST00000391813 CMPK2Q5EBM0 449 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 VWA5B1Q5TIE3 1220 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 ZYG11AQ6WRX3 759 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 C16orf62Q7Z3J2 963 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 MCOLN3Q8TDD5 553 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 TRAPPC12Q8WVT3 735 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 SERAC1Q96JX3 654 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 SERPINB11Q96P15 392 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 ADAM2Q99965 735 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 SP140LQ9H930 580 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 MSRAQ9UJ68 235 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 SAMD4AQ9UPU9 718 aaKnown RBP19.71■□□□□ 0.75
SHANK1-203ENST00000391813 IPO13O94829 963 aaKnown RBP19.71■□□□□ 0.75
SHANK1-203ENST00000391813 NR2F6P10588 404 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 EDEM1Q92611 657 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 ZNF112Q9UJU3 913 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 PCDHB5Q9Y5E4 795 aa19.71■□□□□ 0.75
SHANK1-203ENST00000391813 BCKDKO14874 412 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 CKMP06732 381 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SMIM10L2AP0DMW4 78 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SMIM10L2BP0DMW5 78 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SMIM11AP58511 58 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 PDSS2Q86YH6 399 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 TMCO6Q96DC7 493 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 PANX3Q96QZ0 392 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 TDRD1Q9BXT4 1180 aaKnown RBP19.7■□□□□ 0.74
SHANK1-203ENST00000391813 COX7A2P14406 83 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 FMO4P31512 558 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 ZC3H12AQ5D1E8 599 aaKnown RBP19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SLC4A11Q8NBS3 891 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 PIK3R3Q92569 461 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 LGMNQ99538 433 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 GATA5Q9BWX5 397 aaPredicted RBP19.7■□□□□ 0.74
SHANK1-203ENST00000391813 HIPK3Q9H422 1215 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 RCOR3Q9P2K3 495 aaPredicted RBP19.7■□□□□ 0.74
SHANK1-203ENST00000391813 FAM50BQ9Y247 325 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UBE2QL1A1L167 161 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A9O60656 530 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 RGS20O76081 388 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A6P19224 532 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A1P22309 533 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A4P22310 534 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A3P35503 534 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A5P35504 534 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 ATP12AP54707 1039 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 ANKRD22Q5VYY1 191 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 PGBD3Q8N328 593 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SELENOMQ8WWX9 145 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 KAT8Q9H7Z6 458 aaKnown RBP19.7■□□□□ 0.74
SHANK1-203ENST00000391813 MARCH7Q9H992 704 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A7Q9HAW7 530 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A10Q9HAW8 530 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 UGT1A8Q9HAW9 530 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 OR12D3Q9UGF7 316 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 VWA7Q9Y334 891 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 LRRC37A3O60309 1634 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SLC28A1O00337 649 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms