RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MCM9Q9NXL9 1143 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.29□□□□□ -1.88
TRAV40-201ENST00000390467 TEX22C9J3V5 150 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 MT-CYBP00156 380 aaPredicted RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 AMBPP02760 352 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 MAOAP21397 527 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 DDIT3P35638 169 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TMPOP42166 694 aaKnown RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 KCNT1Q5JUK3 1230 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TXNDC8Q6A555 127 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 RGMBQ6NW40 437 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 SLC22A25Q6T423 547 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 LCTLQ6UWM7 567 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TAOK1Q7L7X3 1001 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 LINGO2Q7L985 606 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TMTC1Q8IUR5 882 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 ZNF34Q8IZ26 560 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 C1orf87Q8N0U7 546 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 ZBTB2Q8N680 514 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 KCNH5Q8NCM2 988 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 BEST2Q8NFU1 509 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TNIP2Q8NFZ5 429 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 HERVK_113Q902F9 699 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 WBP2Q969T9 261 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 ZNF501Q96CX3 271 aaPredicted RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 ZNF570Q96NI8 536 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 RPS6KC1Q96S38 1066 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 PCYT2Q99447 389 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TRMT61BQ9BVS5 477 aaKnown RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 INTS2Q9H0H0 1204 aaKnown RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 ZNF696Q9H7X3 374 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 PCDH9Q9HC56 1237 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 MMP25Q9NPA2 562 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TMEM30AQ9NV96 361 aa3.28□□□□□ -1.88
TRAV40-201ENST00000390467 LSM4Q9Y4Z0 139 aaKnown RBP3.28□□□□□ -1.88
TRAV40-201ENST00000390467 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 GOLGA6L10A0A0M3HER8 536 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 A0A1W2PS18 150 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 ASPDHA6ND91 283 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 TMEM202A6NGA9 273 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 CAPN9O14815 690 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 LDLRAD4O15165 306 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 APOHP02749 345 aaPredicted RBP3.27□□□□□ -1.89
TRAV40-201ENST00000390467 GPD2P43304 727 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 CLCNKAP51800 687 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 HNRNPH2P55795 449 aaKnown RBP3.27□□□□□ -1.89
TRAV40-201ENST00000390467 UBE3AQ05086 875 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 RNPS1Q15287 305 aaKnown RBP3.27□□□□□ -1.89
TRAV40-201ENST00000390467 TCTN1Q2MV58 587 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 GRAMD1BQ3KR37 738 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 KRBA2Q6ZNG9 492 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 QSOX2Q6ZRP7 698 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 SLC24A4Q8NFF2 622 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 PPM1EQ8WY54 764 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 ISCA1Q9BUE6 129 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 PPP1R3EQ9H7J1 279 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 BPIFA1Q9NP55 256 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 RIC8AQ9NPQ8 531 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 BEX4Q9NWD9 120 aaPredicted RBP3.27□□□□□ -1.89
TRAV40-201ENST00000390467 FBXO9Q9UK97 447 aaPredicted RBP3.27□□□□□ -1.89
TRAV40-201ENST00000390467 PADI1Q9ULC6 663 aa3.27□□□□□ -1.89
TRAV40-201ENST00000390467 EDIL3O43854 480 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 TFP02787 698 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 MYOD1P15172 320 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 CD53P19397 219 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 CORO1AP31146 461 aaKnown RBP3.26□□□□□ -1.89
TRAV40-201ENST00000390467 FMO5P49326 533 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 ATP12AP54707 1039 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 PPP2R5BQ15173 497 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 NFIL3Q16649 462 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 C14orf177Q52M58 125 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 SLC45A4Q5BKX6 768 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 IRAK1BP1Q5VVH5 260 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 NFE4Q86UQ8 179 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAV40-201ENST00000390467 ZCCHC9Q8N567 271 aaKnown RBP3.26□□□□□ -1.89
TRAV40-201ENST00000390467 C11orf65Q8NCR3 313 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 DMBX1Q8NFW5 382 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 HUS1BQ8NHY5 278 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 TAF15Q92804 592 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAV40-201ENST00000390467 PABPC5Q96DU9 382 aaKnown RBP3.26□□□□□ -1.89
TRAV40-201ENST00000390467 FBXO17Q96EF6 278 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 CMKLR1Q99788 373 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 C1QTNF5Q9BXJ0 243 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 PLEKHA4Q9H4M7 779 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 TMEM160Q9NX00 188 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 AMDHD2Q9Y303 409 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 FAM96BQ9Y3D0 163 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 OR2W1Q9Y3N9 320 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 COMMD10Q9Y6G5 202 aa3.26□□□□□ -1.89
TRAV40-201ENST00000390467 AKR1B15C9JRZ8 316 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 EIF3FO00303 357 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 FTCDO95954 541 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 LDLRP01130 860 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 GM2AP17900 193 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 PSMC2P35998 433 aaKnown RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 GGT5P36269 586 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 PGM1P36871 562 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 USP8P40818 1118 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms