RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PRIM2P49643 509 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 RPL38P63173 70 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 CYP4F2P78329 520 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 MBTD1Q05BQ5 628 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 PPP1R8Q12972 351 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 TOP3AQ13472 1001 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 HERC3Q15034 1050 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 C9orf57Q5W0N0 161 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 LRRC52Q8N7C0 313 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 MCFD2Q8NI22 146 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 DHRS4Q9BTZ2 278 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 NUAK2Q9H093 628 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 HIPK3Q9H422 1215 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 MINDY3Q9H8M7 445 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 CBX4O00257 560 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC22A2O15244 555 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 HCRTO43612 131 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 NPHS1O60500 1241 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SH3BGRLO75368 114 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 AHSGP02765 367 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 FTH1P02794 183 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 TPTEP56180 551 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 MAPRE1Q15691 268 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 NECAB2Q7Z6G3 386 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ESAMQ96AP7 390 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ISOC1Q96CN7 298 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SOX17Q9H6I2 414 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 RASSF1Q9NS23 344 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 GIN1Q9NXP7 522 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ADGRE2Q9UHX3 823 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SIX4Q9UIU6 781 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 DENRO43583 198 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 TSC22D2O75157 780 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 GPIP06744 558 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 GRM5P41594 1212 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 IL2P60568 153 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 MS4A2Q01362 244 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 GK3PQ14409 553 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 CHSY3Q70JA7 882 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 GLT6D1Q7Z4J2 308 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 OR2T12Q8NG77 320 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 FADS2O95864 444 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 CES1P23141 567 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 SOAT1P35610 550 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 TBX4P57082 545 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 INAQ16352 499 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 SYPL2Q5VXT5 272 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 UGT2A3Q6UWM9 527 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 GPRIN3Q6ZVF9 776 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 FBXO32Q969P5 355 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 SEMA3CQ99985 751 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 MOCS1Q9NZB8 636 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 SUCOQ9UBS9 1254 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 GIMAP2Q9UG22 337 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 BTBD3Q9Y2F9 522 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 C5orf58C9J3I9 102 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 RECQL5O94762 991 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 S100A3P33764 101 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 SLC10A2Q12908 348 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 TRAP1Q12931 704 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 PDCD4Q53EL6 469 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF621Q6ZSS3 439 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZC3HC1Q86WB0 502 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 FCRL2Q96LA5 508 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 HAPLN2Q9GZV7 340 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 XYLT2Q9H1B5 865 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 SPASTQ9UBP0 616 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 NOBOXO60393 691 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 ALOX15P16050 662 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 AARS2Q5JTZ9 985 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 OVOS1Q6IE37 1185 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 NAPRTQ6XQN6 538 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 ROPN1LQ96C74 230 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 TSEN34Q9BSV6 310 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 TRIM8Q9BZR9 551 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 FZD8Q9H461 694 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 PCDH12Q9NPG4 1184 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 TBC1D30Q9Y2I9 924 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 CHD4Q14839 1912 aa13.14□□□□□ -0.31
TRAPPC9-201ENST00000389328 F5H5T6 163 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms