RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 NLE1Q9NVX2 485 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 MARCH4Q9P2E8 410 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CRYL1Q9Y2S2 319 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CCDC162PA2VCL2 907 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 DPPA5A6NC42 116 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 OR51F1A6NGY5 319 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 A8MT66 165 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CCL22O00626 93 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 FKBP6O75344 327 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 GJB3O75712 270 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 FDXRP22570 491 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 MAGEA8P43361 318 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CCR10P46092 362 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 SESN3P58005 492 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CUL3Q13618 768 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 TAF1AQ15573 450 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 MUM1Q2TAK8 710 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 SH2D4BQ5SQS7 431 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 NXNQ6DKJ4 435 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 LDB1Q86U70 411 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 OR13C4Q8NGS5 318 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 MOCOSQ96EN8 888 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CDKN2AIPNLQ96HQ2 116 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 TCF12Q99081 682 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 ADGRE3Q9BY15 652 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 MUC3BQ9H195 1237 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 VPS9D1Q9Y2B5 631 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 TYW5A2RUC4 315 aaKnown RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 CBX4O00257 560 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 PFDN6O15212 129 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 CCNT2O60583 730 aaKnown RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 TBX10O75333 385 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 CR2P20023 1033 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 STC1P52823 247 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 CDKN2DP55273 166 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 PLD1Q13393 1074 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 GPR158Q5T848 1215 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 AFTPHQ6ULP2 937 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 FRMD7Q6ZUT3 714 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 OR52K2Q8NGK3 314 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 CLPTM1LQ96KA5 538 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 LENG8Q96PV6 779 aaPredicted RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 PANX3Q96QZ0 392 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 MICAL3Q7RTP6 2002 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 PRRG1O14668 218 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 NVLO15381 856 aaKnown RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 IMPDH2P12268 514 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 IMPDH1P20839 514 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 PIK3R1P27986 724 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 RAB33AQ14088 237 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 TYSND1Q2T9J0 566 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 LRRC23Q53EV4 343 aaPredicted RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 AAGABQ6PD74 315 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 GLT6D1Q7Z4J2 308 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 DEFB107AQ8IZN7 70 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 ANKRD49Q8WVL7 239 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 MAELQ96JY0 434 aaKnown RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 ASB2Q96Q27 587 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 TDRD1Q9BXT4 1180 aaKnown RBP12.63□□□□□ -0.39
VPS16-202ENST00000380445 SHCBP1LQ9BZQ2 653 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 RNF38Q9H0F5 515 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 CCDC68Q9H2F9 335 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 SYTL2Q9HCH5 934 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 ACSS2Q9NR19 701 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 NDE1Q9NXR1 346 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 STOML2Q9UJZ1 356 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 MAFFQ9ULX9 164 aa12.63□□□□□ -0.39
VPS16-202ENST00000380445 URODP06132 367 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 IRF1P10914 325 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 ATP6V1C1P21283 382 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 SUOXP51687 545 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 EPHB3P54753 998 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 NFKB2Q00653 900 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 TLE2Q04725 743 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 BTKQ06187 659 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 CYLC2Q14093 348 aaPredicted RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 HERC3Q15034 1050 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 RNF219Q5W0B1 726 aaPredicted RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 PGM2L1Q6PCE3 622 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 C16orf89Q6UX73 402 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 LRRC74BQ6ZQY2 392 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 ISCA2Q86U28 154 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 MYLK4Q86YV6 388 aaPredicted RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 DTX3LQ8TDB6 740 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 JADE3Q92613 823 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 CYP4F12Q9HCS2 524 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 CDH22Q9UJ99 828 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 NEMP2A6NFY4 417 aa12.62□□□□□ -0.39
VPS16-202ENST00000380445 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
VPS16-202ENST00000380445 C1RP00736 705 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms