RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PSMA3P25788 255 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 NKX3-2P78367 333 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 CD83Q01151 205 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ELAVL2Q12926 359 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF177Q13360 481 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 IGSF11Q5DX21 431 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TMTC4Q5T4D3 741 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 STEAP4Q687X5 459 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 RNF43Q68DV7 783 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF781Q8N8C0 355 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 DTX3LQ8TDB6 740 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 FCRL5Q96RD9 977 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 CINPQ9BW66 212 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TBC1D10AQ9BXI6 508 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 OSBPL1AQ9BXW6 950 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 FCF1Q9Y324 198 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 YIPF1Q9Y548 306 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 SPTBN5Q9NRC6 3674 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MYO16Q9Y6X6 1858 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TRIM43BA6NCK2 446 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZW10O43264 779 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TBL1XO60907 577 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 GABRR2P28476 465 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MZF1P28698 734 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 VEPH1Q14D04 833 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MANEALQ5VSG8 457 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZC3HC1Q86WB0 502 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 CCNJLQ8IV13 435 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MFSD6LQ8IWD5 586 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF461Q8TAF7 563 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF558Q96NG5 402 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 IL12RB2Q99665 862 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 GTSE1Q9NYZ3 720 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 DCDC2Q9UHG0 476 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TCAF1Q9Y4C2 921 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 PRR5-ARHGAP8B1AHC4 643 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 DHRS4L1P0CG22 281 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 T-ENOLP0DO92 83 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 COL6A1P12109 1028 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 STMN1P16949 149 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MPSTP25325 297 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ARNTP27540 789 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 EPHB1P54762 984 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 SMAD4Q13485 552 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MRPL58Q14197 206 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 LRRC26Q2I0M4 334 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 LACTB2Q53H82 288 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 RBM23Q86U06 439 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ACE2Q9BYF1 805 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 NUF2Q9BZD4 464 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ENTPD7Q9NQZ7 604 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TXLNGQ9NUQ3 528 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 FAM8A1Q9UBU6 413 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 GGA2Q9UJY4 613 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 NOSIPQ9Y314 301 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MYO15AQ9UKN7 3530 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 SDK1Q7Z5N4 2213 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TMEM247A6NEH6 219 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 B2RBV5 119 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TMEM189-UBE2V1I3L0A0 370 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 AP3B1O00203 1094 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CCDC166P0CW27 439 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 FGF3P11487 239 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 EPHA3P29320 983 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CDKN1CP49918 316 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 GNA12Q03113 381 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CDH18Q13634 790 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 HNRNPDQ14103 355 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 POM121L1PQ3SYA9 428 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 ACCSLQ4AC99 568 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 PDPK2PQ6A1A2 396 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 FSTL5Q8N475 847 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 GPAMQ9HCL2 828 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TAGLN3Q9UI15 199 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 ATPIF1Q9UII2 106 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 HBS1LQ9Y450 684 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 ERI2A8K979 691 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TTC34A8MYJ7 566 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CCL16O15467 120 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 DCXO43602 365 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 STC2O76061 302 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CD1EP15812 388 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 ITGB6P18564 788 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 STT3AP46977 705 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 STK11Q15831 433 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SNX30Q5VWJ9 437 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TREML1Q86YW5 311 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TTC8Q8TAM2 541 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 POLR1EQ9GZS1 481 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SLC25A51Q9H1U9 297 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TLE6Q9H808 572 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 PRM3Q9NNZ6 103 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 PAK6Q9NQU5 681 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms