RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LGR5O75473 907 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 C1RP00736 705 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 IL1BP01584 269 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 HSMCR30P0CW71 290 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 POU1F1P28069 291 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 THOP1P52888 689 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 TIMM50Q3ZCQ8 353 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 ZNF438Q7Z4V0 828 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 C11orf74Q86VG3 221 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 FLCNQ8NFG4 579 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 RP9Q8TA86 221 aaKnown RBP15.05■□□□□ 0
NPHP4-201ENST00000378156 CLEC4CQ8WTT0 213 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 ATL1Q8WXF7 558 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 CADM1Q9BY67 442 aaKnown RBP15.05■□□□□ 0
NPHP4-201ENST00000378156 ARHGEF3Q9NR81 526 aa15.05■□□□□ 0
NPHP4-201ENST00000378156 TRMT13Q9NUP7 481 aaKnown RBP15.05■□□□□ 0
NPHP4-201ENST00000378156 UGT1A9O60656 530 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 MLYCDO95822 493 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 HTR7P34969 479 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 NDUFV1P49821 464 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 DAOAP59103 153 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 GAD2Q05329 585 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 PWP1Q13610 501 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 PAGE2BQ5JRK9 111 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 VARS2Q5ST30 1063 aaKnown RBP15.05■□□□□ -0
NPHP4-201ENST00000378156 ADAMTSL2Q86TH1 951 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 NIPA2Q8N8Q9 360 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 CD101Q93033 1021 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 C6orf62Q9GZU0 229 aaPredicted RBP15.05■□□□□ -0
NPHP4-201ENST00000378156 SPRTNQ9H040 489 aaPredicted RBP15.05■□□□□ -0
NPHP4-201ENST00000378156 UGT1A7Q9HAW7 530 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 UGT1A10Q9HAW8 530 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 UGT1A8Q9HAW9 530 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 UNCXA6NJT0 531 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 E9PAM4 449 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 SNPHO15079 494 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 PEX11AO75192 247 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 NEK3P51956 506 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 ATP6V0D1P61421 351 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 ALDH6A1Q02252 535 aaKnown RBP15.05■□□□□ -0
NPHP4-201ENST00000378156 PDK3Q15120 406 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 ZNF618Q5T7W0 954 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 DET1Q7L5Y6 550 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 IFNL1Q8IU54 200 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 NPAS4Q8IUM7 802 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 ENKURQ8TC29 256 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 COPS8Q99627 209 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 CFAP97Q9P2B7 532 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 AP3M1Q9Y2T2 418 aa15.05■□□□□ -0
NPHP4-201ENST00000378156 MYH6P13533 1939 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 GCATO75600 419 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 ATG7O95352 703 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SNRPB2P08579 225 aaKnown RBP15.04■□□□□ -0
NPHP4-201ENST00000378156 CORO1AP31146 461 aaKnown RBP15.04■□□□□ -0
NPHP4-201ENST00000378156 GRIA3P42263 894 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 GPR1P46091 355 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 TOP3AQ13472 1001 aaPredicted RBP15.04■□□□□ -0
NPHP4-201ENST00000378156 HPS6Q86YV9 775 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SYT12Q8IV01 421 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 ZNF567Q8N184 647 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 QSOX1O00391 747 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 CBFA2T3O75081 653 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 TM7SF2O76062 418 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 METTL18O95568 372 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 INHAP05111 366 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 NOVP48745 357 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 PRKCQQ04759 706 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 KLF10Q13118 480 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 RDH11Q8TC12 318 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SPPL2AQ8TCT8 520 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SLC4A5Q9BY07 1137 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SERHL2Q9H4I8 314 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SERHLQ9NQF3 203 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 TMCO1Q9UM00 188 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 CICQ96RK0 1608 aaPredicted RBP15.04■□□□□ -0
NPHP4-201ENST00000378156 CDH13P55290 713 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 NAA20P61599 178 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 PLPP4Q5VZY2 271 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 LPCAT4Q643R3 524 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 FAM81AQ8TBF8 368 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 HTATIP2Q9BUP3 242 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 ROGDIQ9GZN7 287 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 LIMD1Q9UGP4 676 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SPATA2Q9UM82 520 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SIN3BO75182 1162 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 MAGEA10P43363 369 aaPredicted RBP15.04■□□□□ -0
NPHP4-201ENST00000378156 SLC16A1P53985 500 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 LYPLAL1Q5VWZ2 237 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 RAET1GQ6H3X3 334 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 ZNF621Q6ZSS3 439 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 CDH24Q86UP0 819 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 TAC4Q86UU9 113 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 STK32CQ86UX6 486 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
NPHP4-201ENST00000378156 C10orf82Q8WW14 230 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SLC9A7Q96T83 725 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 MINDY3Q9H8M7 445 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 SLC45A1Q9Y2W3 748 aa15.04■□□□□ -0
NPHP4-201ENST00000378156 PIPSLA2A3N6 862 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 PLIN3O60664 434 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms