RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 VARSP26640 1264 aaKnown RBP18.02■□□□□ 0.48
GNE-201ENST00000377902 ARSDP51689 593 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 KPNA2P52292 529 aaKnown RBP18.02■□□□□ 0.48
GNE-201ENST00000377902 PPIL2Q13356 520 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 RAB39AQ14964 217 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 SNX17Q15036 470 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 KCTD21Q4G0X4 260 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 RABL3Q5HYI8 236 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 KIAA0930Q6ICG6 404 aaPredicted RBP18.02■□□□□ 0.48
GNE-201ENST00000377902 Q6ZNX1 250 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 OR6J1Q8NGC5 347 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 SCAMP5Q8TAC9 235 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 DNAJB14Q8TBM8 379 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 HDAC10Q969S8 669 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 VPS45Q9NRW7 570 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 FAIMQ9NVQ4 179 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 VWA7Q9Y334 891 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 ZFC3H1O60293 1989 aaKnown RBP18.02■□□□□ 0.48
GNE-201ENST00000377902 BRCA2P51587 3418 aa18.02■□□□□ 0.48
GNE-201ENST00000377902 LINC00032P0C843 101 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 WNT3AP56704 352 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 ECT2LQ008S8 904 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 IHHQ14623 411 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 PTPRCAPQ14761 206 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 NEDD8Q15843 81 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 FUT11Q495W5 492 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 XKR4Q5GH76 650 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 AARS2Q5JTZ9 985 aaKnown RBP18.02■□□□□ 0.47
GNE-201ENST00000377902 DDIASQ8IXT1 998 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 MFSD2AQ8NA29 543 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 C3orf58Q8NDZ4 430 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 OR6P1Q8NGX9 317 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.47
GNE-201ENST00000377902 PAAF1Q9BRP4 392 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 HIPK3Q9H422 1215 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 POLR1BQ9H9Y6 1135 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 DOLKQ9UPQ8 538 aa18.02■□□□□ 0.47
GNE-201ENST00000377902 H3BMM5 538 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 MATN3O15232 486 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 INPP4BO15327 924 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 F9P00740 461 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 SMIM10L2AP0DMW4 78 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 SMIM10L2BP0DMW5 78 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 SLC6A2P23975 617 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 DNAJB2P25686 324 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 CCR3P51677 355 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 GEMP55040 296 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 ACAP2Q15057 778 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 PATL1Q86TB9 770 aaKnown RBP18.01■□□□□ 0.47
GNE-201ENST00000377902 ADGRG5Q8IZF4 528 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 PCYOX1LQ8NBM8 494 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 OR13J1Q8NGT2 312 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 MAGEE2Q8TD90 523 aaPredicted RBP18.01■□□□□ 0.47
GNE-201ENST00000377902 VPS33AQ96AX1 596 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 THAP11Q96EK4 314 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 TUBB1Q9H4B7 451 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 MID1IP1Q9NPA3 183 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 ENTPD7Q9NQZ7 604 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 ARPC2O15144 300 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 CLOCKO15516 846 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 XPOTO43592 962 aaKnown RBP18.01■□□□□ 0.47
GNE-201ENST00000377902 SNAP29O95721 258 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 MOCS2O96007 188 aaPredicted RBP18.01■□□□□ 0.47
GNE-201ENST00000377902 RBP1P09455 135 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 FASP25445 335 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 CCT8P50990 548 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 BNIP3Q12983 259 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 CYP51A1Q16850 503 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 PAN2Q504Q3 1202 aaKnown RBP18.01■□□□□ 0.47
GNE-201ENST00000377902 INTS11Q5TA45 600 aaKnown RBP18.01■□□□□ 0.47
GNE-201ENST00000377902 OGFOD2Q6N063 350 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 HACD2Q6Y1H2 254 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 ROPN1LQ96C74 230 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 CCDC126Q96EE4 140 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 TEX37Q96LM6 180 aa18.01■□□□□ 0.47
GNE-201ENST00000377902 TRIM64CA6NLI5 447 aa18■□□□□ 0.47
GNE-201ENST00000377902 CDK14O94921 469 aa18■□□□□ 0.47
GNE-201ENST00000377902 IL10P22301 178 aa18■□□□□ 0.47
GNE-201ENST00000377902 PSMA4P25789 261 aaKnown RBP18■□□□□ 0.47
GNE-201ENST00000377902 POLR2IP36954 125 aaKnown RBP18■□□□□ 0.47
GNE-201ENST00000377902 LEPRP48357 1165 aaKnown RBP18■□□□□ 0.47
GNE-201ENST00000377902 ACADVLP49748 655 aa18■□□□□ 0.47
GNE-201ENST00000377902 CLCNKBP51801 687 aa18■□□□□ 0.47
GNE-201ENST00000377902 DIO3P55073 304 aa18■□□□□ 0.47
GNE-201ENST00000377902 ITKQ08881 620 aa18■□□□□ 0.47
GNE-201ENST00000377902 EMID1Q96A84 441 aaPredicted RBP18■□□□□ 0.47
GNE-201ENST00000377902 VTA1Q9NP79 307 aa18■□□□□ 0.47
GNE-201ENST00000377902 SLC38A7Q9NVC3 462 aa18■□□□□ 0.47
GNE-201ENST00000377902 SLAMF8Q9P0V8 285 aa18■□□□□ 0.47
GNE-201ENST00000377902 ABCD2Q9UBJ2 740 aa18■□□□□ 0.47
GNE-201ENST00000377902 FADS3Q9Y5Q0 445 aa18■□□□□ 0.47
GNE-201ENST00000377902 TTC3P53804 2025 aa18■□□□□ 0.47
GNE-201ENST00000377902 ANGPT2O15123 496 aa18■□□□□ 0.47
GNE-201ENST00000377902 PAGE1O75459 146 aa18■□□□□ 0.47
GNE-201ENST00000377902 ATP6V0D1P61421 351 aa18■□□□□ 0.47
GNE-201ENST00000377902 ATP6AP1Q15904 470 aa18■□□□□ 0.47
GNE-201ENST00000377902 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
GNE-201ENST00000377902 TBPL2Q6SJ96 375 aa18■□□□□ 0.47
GNE-201ENST00000377902 KCTD8Q6ZWB6 473 aa18■□□□□ 0.47
GNE-201ENST00000377902 CILP2Q8IUL8 1156 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms