RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 SRRM3A6NNA2 597 aaPredicted RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 NEMP1O14524 444 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 STX7O15400 261 aaKnown RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 ALDH1A2O94788 518 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 NUDT17P0C025 328 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 NR1D1P20393 614 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 NMBRP28336 390 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 PRAMEP78395 509 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 IFFO1Q0D2I5 559 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 UAP1Q16222 522 aaPredicted RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 LONRF1Q17RB8 773 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 KLHL38Q2WGJ6 581 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 AGBL2Q5U5Z8 902 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 KIAA0930Q6ICG6 404 aaPredicted RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 ZNF449Q6P9G9 518 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 CRTC1Q6UUV9 634 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 CES3Q6UWW8 571 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 TRIM67Q6ZTA4 783 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 CYS1Q717R9 158 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 DPPA4Q7L190 304 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 LYSMD3Q7Z3D4 306 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 CACUL1Q86Y37 369 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 HDDC3Q8N4P3 179 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 GANCQ8TET4 914 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 PBXIP1Q96AQ6 731 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 ZBTB9Q96C00 473 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 NECAB3Q96P71 396 aaPredicted RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 UHRF1Q96T88 793 aaPredicted RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 IER2Q9BTL4 223 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 MKRN2Q9H000 416 aaKnown RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 PPANQ9NQ55 473 aaKnown RBP15.03■□□□□ -0
YIPF3-202ENST00000372422 TREX1Q9NSU2 369 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 NCKAP1Q9Y2A7 1128 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 SIT1Q9Y3P8 196 aa15.03■□□□□ -0
YIPF3-202ENST00000372422 TCRBV9S1A1TA0A576 114 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 CCDC78A2IDD5 438 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 H0Y858 1186 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 AURKAO14965 403 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 RNASEH2AO75792 299 aaKnown RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 P2RY2P41231 377 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 MAGEA9P43362 315 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 RPS9P46781 194 aaKnown RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 ZNF140P52738 457 aaPredicted RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 CNTN1Q12860 1018 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 STAT4Q14765 748 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 CNGA3Q16281 694 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 LRRC73Q5JTD7 316 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 ZDHHC20Q5W0Z9 365 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 LRRC66Q68CR7 880 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 PDPK2PQ6A1A2 396 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 ESRP1Q6NXG1 681 aaKnown RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 TMEM92Q6UXU6 159 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 KBTBD6Q86V97 674 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 TTC30BQ8N4P2 665 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 FBF1Q8TES7 1133 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 EDAQ92838 391 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 CLDN23Q96B33 292 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 CERS2Q96G23 380 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 SMIM14Q96QK8 99 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 CYTH2Q99418 400 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 TRIM56Q9BRZ2 755 aaKnown RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 EPB41L4BQ9H329 900 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 CD248Q9HCU0 757 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 C20orf96Q9NUD7 363 aaPredicted RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 NLE1Q9NVX2 485 aaPredicted RBP15.02■□□□□ -0
YIPF3-202ENST00000372422 NFS1Q9Y697 457 aa15.02■□□□□ -0
YIPF3-202ENST00000372422 ZCWPW2A0A1B0GU75 182 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 A8MX80 341 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 SLC7A4O43246 635 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 DCXO43602 365 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 RPP40O75818 363 aaKnown RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 CLDN7O95471 211 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 C7P10643 843 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 MMP12P39900 470 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 METAP1P53582 386 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 ACVR1Q04771 509 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 FZD5Q13467 585 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 CDKN3Q16667 212 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 KIAA1324Q6UXG2 1013 aaKnown RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 USP30Q70CQ3 517 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 RAVER1Q8IY67 606 aaKnown RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 FLCNQ8NFG4 579 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 TSTD1Q8NFU3 115 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 OR4K2Q8NGD2 314 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 UHMK1Q8TAS1 419 aaKnown RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 CALML6Q8TD86 181 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 DNAJC1Q96KC8 554 aaKnown RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 MRGPRX1Q96LB2 322 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 ZNF778Q96MU6 729 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 FCRL3Q96P31 734 aaPredicted RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 CHRDQ9H2X0 955 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 ACSS3Q9H6R3 686 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 PPCSQ9HAB8 311 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 RAD18Q9NS91 495 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 POLR3BQ9NW08 1133 aaPredicted RBP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 FBXL12Q9NXK8 326 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 MOCS1Q9NZB8 636 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 PKD2L2Q9NZM6 624 aa15.02□□□□□ -0.01
YIPF3-202ENST00000372422 BCCIPQ9P287 314 aaKnown RBP eCLIP15.02□□□□□ -0.01
YIPF3-202ENST00000372422 COL6A3P12111 3177 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms