RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 LINGO2Q7L985 606 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 SPATA6LQ8N4H0 392 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 RFLNBQ8N5W9 214 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 KBTBD3Q8NAB2 608 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 DUSP19Q8WTR2 217 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 FIG4Q92562 907 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 CD101Q93033 1021 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TMEM19Q96HH6 336 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 PCYT2Q99447 389 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TUBA1CQ9BQE3 449 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 H2AFJQ9BTM1 129 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 SPRY4Q9C004 299 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 CSTL1Q9H114 145 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 C17orf75Q9HAS0 396 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TXLNGQ9NUQ3 528 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 SARDHQ9UL12 918 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 ZNF711Q9Y462 761 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 SCINQ9Y6U3 715 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 A0A1W2PQM1 296 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 IRF1P10914 325 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 XBP1P17861 261 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CD58P19256 250 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 FUT6P51993 359 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 POU3F1Q03052 451 aaPredicted RBP4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 NEXNQ0ZGT2 675 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 NAE1Q13564 534 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CTF1Q16619 201 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 ALG11Q2TAA5 492 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 PPP6R3Q5H9R7 873 aaPredicted RBP4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 C9orf139Q6ZV77 190 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 SLC46A3Q7Z3Q1 461 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CHERPQ8IWX8 916 aaKnown RBP4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CCDC13Q8IYE1 715 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CNTROBQ8N137 903 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CADM4Q8NFZ8 388 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 OR2AK2Q8NG84 335 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 HMGCLL1Q8TB92 370 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 SLC20A1Q8WUM9 679 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 SECTM1Q8WVN6 248 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CMKLR1Q99788 373 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 EVA1AQ9H8M9 152 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 PPP1R14DQ9NXH3 145 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 MPP6Q9NZW5 540 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 MDFICQ9P1T7 246 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 CEPT1Q9Y6K0 416 aa4.51□□□□□ -1.69
RNU4-28P-201ENST00000364739 TNFSF14O43557 240 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 LMX1BO60663 402 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 AGR2O95994 175 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 F9P00740 461 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 METAP2P50579 478 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 CLCN3P51790 818 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 ACSM2AQ08AH3 577 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 PTP4A2Q12974 167 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 FGFBP1Q14512 234 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 RGMBQ6NW40 437 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 MEX3BQ6ZN04 569 aaKnown RBP4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 EXOC3L1Q86VI1 746 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 SFR1Q86XK3 245 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 SMC5Q8IY18 1101 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 NAGSQ8N159 534 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 VPS33BQ9H267 617 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 MMP25Q9NPA2 562 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 WASH6PQ9NQA3 447 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 HINT3Q9NQE9 182 aaKnown RBP4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 MKLN1Q9UL63 735 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 VDAC3Q9Y277 283 aa4.5□□□□□ -1.69
RNU4-28P-201ENST00000364739 A6NLC8 198 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 BMPR1BO00238 502 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 RFPL2O75678 378 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 KRT36O76013 467 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 FTCDO95954 541 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 UMODP07911 640 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 ATP1A3P13637 1013 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 HLA-DOBP13765 273 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 IL7RP16871 459 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 AMD1P17707 334 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 MAOAP21397 527 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 KCNA5P22460 613 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 DGKAP23743 735 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 BDKRB2P30411 391 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 ABCD1P33897 745 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 HARS2P49590 506 aaKnown RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 CTCFP49711 727 aaPredicted RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 RELQ04864 619 aaPredicted RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 GPATCH4Q5T3I0 446 aaKnown RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 NAA35Q5VZE5 725 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 CCNI2Q6ZMN8 369 aaPredicted RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 SLC9B2Q86UD5 537 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 CIARTQ8N365 385 aaPredicted RBP4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 MAB21L3Q8N8X9 362 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 BBS10Q8TAM1 723 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 ZUFSPQ96AP4 578 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 TTC14Q96N46 770 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 AGXT2Q9BYV1 514 aa4.49□□□□□ -1.69
RNU4-28P-201ENST00000364739 UBTD1Q9HAC8 227 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms