RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 CCDC78A2IDD5 438 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 MROH6A6NGR9 719 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 FAM170BA6NMN3 283 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 C2orf81A6NN90 581 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 LDB2O43679 373 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 PAPSS2O95340 614 aaPredicted RBP20.67■□□□□ 0.9
SHISA4-201ENST00000362011 CYP2A6P11509 494 aaPredicted RBP20.67■□□□□ 0.9
SHISA4-201ENST00000362011 TIMP2P16035 220 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 STX2P32856 288 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 HNF1BP35680 557 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 RPS9P46781 194 aaKnown RBP20.67■□□□□ 0.9
SHISA4-201ENST00000362011 COPAP53621 1224 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 PDE1BQ01064 536 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 FZD5Q13467 585 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 CST6Q15828 149 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 TTC30BQ8N4P2 665 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 STYXQ8WUJ0 223 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 PEX13Q92968 403 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 FCRL3Q96P31 734 aaPredicted RBP20.67■□□□□ 0.9
SHISA4-201ENST00000362011 MCCC1Q96RQ3 725 aaPredicted RBP20.67■□□□□ 0.9
SHISA4-201ENST00000362011 LYSMD1Q96S90 227 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 FUT8Q9BYC5 575 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 GPR63Q9BZJ6 419 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 PLAC1Q9HBJ0 212 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 SPATA6Q9NWH7 488 aaPredicted RBP20.67■□□□□ 0.9
SHISA4-201ENST00000362011 RIMKLBQ9ULI2 386 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 PLAAQ9Y263 795 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 ARL5AQ9Y689 179 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 FAM169AQ9Y6X4 670 aa20.67■□□□□ 0.9
SHISA4-201ENST00000362011 A0A1W2PQF6 199 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 NPIPB15A6NHN6 443 aaPredicted RBP20.66■□□□□ 0.9
SHISA4-201ENST00000362011 LAMTOR5O43504 91 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 SLC4A1P02730 911 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 NUDT17P0C025 328 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 PAMP19021 973 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 C5AR1P21730 350 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 LPOP22079 712 aaPredicted RBP20.66■□□□□ 0.9
SHISA4-201ENST00000362011 SUOXP51687 545 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 NEK3P51956 506 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 METAP1P53582 386 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 RPS14P62263 151 aaKnown RBP20.66■□□□□ 0.9
SHISA4-201ENST00000362011 PTPRRQ15256 657 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 LYSMD3Q7Z3D4 306 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 TTC7BQ86TV6 843 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 FBF1Q8TES7 1133 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 MFSD3Q96ES6 412 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 ZNF778Q96MU6 729 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 TREX1Q9NSU2 369 aa20.66■□□□□ 0.9
SHISA4-201ENST00000362011 TRPM6Q9BX84 2022 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 C1orf232A0A0U1RR37 186 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ZCWPW2A0A1B0GU75 182 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 CHURC1-FNTBB4DL54 471 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 AURKAO14965 403 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 MID1O15344 667 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 VIPR1P32241 457 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ZNF140P52738 457 aaPredicted RBP20.65■□□□□ 0.9
SHISA4-201ENST00000362011 FRG1Q14331 258 aaKnown RBP20.65■□□□□ 0.9
SHISA4-201ENST00000362011 SKIDA1Q1XH10 827 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 LRRC73Q5JTD7 316 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ESRP1Q6NXG1 681 aaKnown RBP20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ERAP2Q6P179 960 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 FBXL19Q6PCT2 694 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 Q6ZS52 159 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ERN2Q76MJ5 926 aaKnown RBP20.65■□□□□ 0.9
SHISA4-201ENST00000362011 CCDC77Q9BR77 488 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 HDAC8Q9BY41 377 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 VIPAS39Q9H9C1 493 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ZFYVE1Q9HBF4 777 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 CD248Q9HCU0 757 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 PCDH12Q9NPG4 1184 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 B4GALT6Q9UBX8 382 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 SLC2A6Q9UGQ3 507 aa20.65■□□□□ 0.9
SHISA4-201ENST00000362011 DOCK9Q9BZ29 2069 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 TCRBV9S1A1TA0A576 114 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 BUD23O43709 281 aaKnown RBP20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ADRB3P13945 408 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 FAM193AP78312 1265 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ELP6Q0PNE2 266 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ARHGEF7Q14155 803 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 STAT4Q14765 748 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 LONRF1Q17RB8 773 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ALS2CLQ60I27 953 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 KIAA0930Q6ICG6 404 aaPredicted RBP20.64■□□□□ 0.89
SHISA4-201ENST00000362011 CRTC1Q6UUV9 634 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 MAMSTRQ6ZN01 415 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 IQCKQ8N0W5 287 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 CERS2Q96G23 380 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 DNAJC1Q96KC8 554 aaKnown RBP20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ZIM3Q96PE6 472 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ACSS3Q9H6R3 686 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 PRMT8Q9NR22 394 aaPredicted RBP20.64■□□□□ 0.89
SHISA4-201ENST00000362011 NLE1Q9NVX2 485 aaPredicted RBP20.64■□□□□ 0.89
SHISA4-201ENST00000362011 POLR3BQ9NW08 1133 aaPredicted RBP20.64■□□□□ 0.89
SHISA4-201ENST00000362011 ZSCAN32Q9NX65 697 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 RABGEF1Q9UJ41 708 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 PKP3Q9Y446 797 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 KCTD3Q9Y597 815 aa20.64■□□□□ 0.89
SHISA4-201ENST00000362011 STX7O15400 261 aaKnown RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 ATP8B1O43520 1251 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms