RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 PTGDR2Q9Y5Y4 395 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 A0A0A0MRY4 1105 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ACKR2O00590 384 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SDHDO14521 159 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 MSI1O43347 362 aaKnown RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 MOCS2O96007 188 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CACNB2Q08289 660 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 AQP6Q13520 282 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SOWAHAQ2M3V2 549 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CNSTQ6PJW8 725 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 MMAAQ8IVH4 418 aaKnown RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SPATA13Q96N96 652 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF214Q9UL59 606 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 TIMM22Q9Y584 194 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ILVBLA1L0T0 632 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CCL22O00626 93 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ALOX5P09917 674 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CHRNB1P11230 501 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CYP3A5P20815 502 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SLC36A3Q495N2 470 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 RABL3Q5HYI8 236 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 COLEC12Q5KU26 742 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SPATC1Q76KD6 591 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 MICU2Q8IYU8 434 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 OR6P1Q8NGX9 317 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF486Q96H40 463 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 MAGED4Q96JG8 741 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 DEPDC7Q96QD5 511 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SLC25A23Q9BV35 468 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 PDLIM7Q9NR12 457 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 PDGFCQ9NRA1 345 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 VTI1BQ9UEU0 232 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ACOT9Q9Y305 439 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 UGT2A1Q9Y4X1 527 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CRCPO75575 148 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 IL18RAPO95256 599 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 UGT2B4P06133 528 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 NDUFV1P49821 464 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 LIMK2P53671 638 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 LRP8Q14114 963 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 SMU1Q2TAY7 513 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 TMTC4Q5T4D3 741 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 PLEKHG7Q6ZR37 379 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 RFPL4BQ6ZWI9 263 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ERO1BQ86YB8 467 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 LILRB4Q8NHJ6 448 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 MCRS1Q96EZ8 462 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CGREF1Q99674 301 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 HOXC10Q9NYD6 342 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ANKMY1Q9P2S6 941 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 USP22Q9UPT9 525 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 CAB39Q9Y376 341 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-201ENST00000361716 U3KQV3 271 aa12.72□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF701M0R085 212 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 JRKO75564 520 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 GSNP06396 782 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ITGB6P18564 788 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 BDNFP23560 247 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 TGFBR1P36897 503 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF773Q6PK81 442 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 DENND6AQ8IWF6 608 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ANKFN1Q8N957 763 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ITCHQ96J02 903 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 PCYT2Q99447 389 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 LRRC40Q9H9A6 602 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 IFT52Q9Y366 437 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 H3BMM5 538 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 IQCF3P0C7M6 154 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 MBL2P11226 248 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 INSRRP14616 1297 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 SHMT2P34897 504 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 TMBIM6P55061 237 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 TPI1P60174 286 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 C1QTNF8P60827 252 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 CLPPQ16740 277 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ARHGAP17Q68EM7 881 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 RALGPS2Q86X27 583 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ARMC8Q8IUR7 673 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF567Q8N184 647 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 SMG8Q8ND04 991 aaKnown RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 VPS33AQ96AX1 596 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 TMEM74Q96NL1 305 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 PRRG3Q9BZD7 231 aa12.71□□□□□ -0.37
VAMP1-201ENST00000361716 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms