RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CHSY3Q70JA7 882 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MCOLN3Q8TDD5 553 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 HEXDCQ8WVB3 486 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC47A1Q96FL8 570 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 KLHL32Q96NJ5 620 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CLPBQ9H078 707 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 EIF2B3Q9NR50 452 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CARD8Q9Y2G2 431 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 TIMM13Q9Y5L4 95 aaPredicted RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 TSPAN9O75954 239 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SERPINF2P08697 491 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC39A4Q6P5W5 647 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MIB1Q86YT6 1006 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MICALL2Q8IY33 904 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 FBXL20Q96IG2 436 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 EBF1Q9UH73 591 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CRLS1Q9UJA2 301 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 PSAT1Q9Y617 370 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CRYBG1Q9Y4K1 1723 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CAPN14A8MX76 684 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 RGS14O43566 566 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CNPP09543 421 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MTHFD1P11586 935 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 GCAP28676 217 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 HNRNPDQ14103 355 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC25A52Q3SY17 297 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 GALNT5Q7Z7M9 940 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 ATP6V0D2Q8N8Y2 350 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 C1orf127Q8N9H9 656 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 TMIGD2Q96BF3 282 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 RASSF1Q9NS23 344 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MKS1Q9NXB0 559 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SPASTQ9UBP0 616 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 FAM187BQ17R55 369 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF549Q6P9A3 640 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 TMEM110Q86TL2 294 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CCDC185Q8N715 623 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 CDC14AQ9UNH5 594 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 KLHL20Q9Y2M5 609 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SAMHD1Q9Y3Z3 626 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SNNO75324 88 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ARHGEF7Q14155 803 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 TYW3Q6IPR3 259 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 B3GALNT2Q8NCR0 500 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 GAB3Q8WWW8 586 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 REXO5Q96IC2 774 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 FIZ1Q96SL8 496 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 F8W810 466 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 GJB1P08034 283 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 SPDYE7PQ495Y7 208 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF57Q68EA5 555 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 KIAA1841Q6NSI8 718 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 GPRIN3Q6ZVF9 776 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 DENND6AQ8IWF6 608 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 OTUB1Q96FW1 271 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 SPATA7Q9P0W8 599 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 MTRRQ9UBK8 725 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ST14Q9Y5Y6 855 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 AGRPO00253 132 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 SPTLC1O15269 473 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 DYNC1LI2O43237 492 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 RSL1D1O76021 490 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC25A27O95847 323 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 TFAP2AP05549 437 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 UGT2B4P06133 528 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 CCT3P49368 545 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 RELAQ04206 551 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 TSNQ15631 228 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF621Q6ZSS3 439 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 CCDC149Q6ZUS6 474 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 CHST15Q7LFX5 561 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 TIMM22Q9Y584 194 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF99A8MXY4 864 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 BMP10O95393 424 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ALDOAP04075 364 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 NPR3P17342 541 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 ADRA1BP35368 520 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 GPD2P43304 727 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 PTPN9P43378 593 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 PPP3CCP48454 512 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 POLD2P49005 469 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 POLR2JP52435 117 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 CTC1Q2NKJ3 1217 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 DGKKQ5KSL6 1271 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 AGBL3Q8NEM8 1001 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 TRPV3Q8NET8 790 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 FEM1AQ9BSK4 669 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 CLEC4MQ9H2X3 399 aaPredicted RBP15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 CATSPERZQ9NTU4 200 aa15.98■□□□□ 0.15
CLSTN1-201ENST00000361311 RBM47A0AV96 593 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ANKRD33BA6NCL7 494 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ZBTB14O43829 449 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 TMCC2O75069 709 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 B3GAT3O94766 335 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 MYCP01106 439 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms