RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SLC9B1Q4ZJI4 515 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PLEKHO1Q53GL0 409 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 C1orf141Q5JVX7 400 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 HAUS3Q68CZ6 603 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 INTS8Q75QN2 995 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MIGA2Q7L4E1 593 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CHD1LQ86WJ1 897 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 METTL25Q8N6Q8 603 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 BMPERQ8N8U9 685 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ADCY4Q8NFM4 1077 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 EXOC6Q8TAG9 804 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZCCHC14Q8WYQ9 949 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 LENG1Q96BZ8 264 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RASL10BQ96S79 203 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SECISBP2Q96T21 854 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 HEMGNQ9BXL5 484 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RBM38Q9H0Z9 239 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCDHAC1Q9H158 963 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 OR10A5Q9H207 317 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SMOC2Q9H3U7 446 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 NSUN3Q9H649 340 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMEM206Q9H813 350 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SERHLQ9NQF3 203 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TUBG2Q9NRH3 451 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 GIMAP4Q9NUV9 329 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ANO10Q9NW15 660 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ACTR3BQ9P1U1 418 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 NXF1Q9UBU9 619 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ACEP12821 1306 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 WDR17Q8IZU2 1322 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MYH9P35579 1960 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RALGAPA2Q2PPJ7 1873 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 FOXO6A8MYZ6 492 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 STX6O43752 255 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 IGHG3P01860 377 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TACSTD2P09758 323 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 C8orf89P0DMQ9 161 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PTGS1P23219 599 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SHMT1P34896 483 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ALDH1A3P47895 512 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CAMLGP49069 296 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 AARSP49588 968 aaKnown RBP eCLIP1.9□□□□□ -2.114e-6■■■■■ 30.6
SMARCAD1-202ENST00000359052 PRMT2P55345 433 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ITIH3Q06033 890 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC39A14Q15043 492 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ARHGAP40Q5TG30 622 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 DHRS4L2Q6PKH6 230 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 LRRC31Q6UY01 552 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ERN2Q76MJ5 926 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMEM25Q86YD3 366 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 NIPA2Q8N8Q9 360 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCDC26Q8TAB7 109 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 COQ2Q96H96 371 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RBM17Q96I25 401 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 FNBP1Q96RU3 617 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PIP5K1AQ99755 562 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 BPIFA3Q9BQP9 254 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SRSF8Q9BRL6 282 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNF703Q9H7S9 590 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 GPAMQ9HCL2 828 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CABP5Q9NP86 173 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 STOX2Q9P2F5 926 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 KLHL3Q9UH77 587 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RABL2BQ9UNT1 228 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCDHA13Q9Y5I0 950 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MRPS18BQ9Y676 258 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 NUP205Q92621 2012 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCSK5Q92824 1860 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PLXND1Q9Y4D7 1925 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM171A2A8MVW0 826 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 H0YIV9 168 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PEX1O43933 1283 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ATG13O75143 517 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 IGHEP01854 428 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 EIF2S1P05198 315 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CSN3P07498 182 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CT62P0C5K7 136 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 NEFHP12036 1026 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SNRPBP14678 240 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 OR1D2P34982 312 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CASRP41180 1078 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 BUD31P41223 144 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CLNS1AP54105 237 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMF1P82094 1093 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 LIPEQ05469 1076 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FRG1Q14331 258 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 WTAPQ15007 396 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 DRICH1Q6PGQ1 229 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TEPPQ6URK8 271 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PLEKHM3Q6ZWE6 761 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CDH26Q8IXH8 852 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 DIS3L2Q8IYB7 885 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TC2NQ8N9U0 490 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PIBF1Q8WXW3 757 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ROBO4Q8WZ75 1007 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 LRRC37BQ96QE4 947 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMEM168Q9H0V1 697 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 MAGIXQ9H6Y5 334 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SNTG1Q9NSN8 517 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms