RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RYKP34925 604 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 CHSY3Q70JA7 882 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 TDRPQ86YL5 185 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 PLEKHG4BQ96PX9 1271 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 LCA5LO95447 670 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 CYP27C1Q4G0S4 372 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 MCCC1Q96RQ3 725 aaPredicted RBP17.27■□□□□ 0.36
COL27A1-201ENST00000356083 AIFM2Q9BRQ8 373 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 OR12D3Q9UGF7 316 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 NAALADL1Q9UQQ1 740 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 HES2Q9Y543 173 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 IL33O95760 270 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 APODP05090 189 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.365e-7■■□□□ 12.3
COL27A1-201ENST00000356083 PER3P56645 1201 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 ACTR3P61158 418 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 GXYLT1Q4G148 440 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 OR52K1Q8NGK4 314 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 XAGE5Q8WWM1 108 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 AP2M1Q96CW1 435 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.36
COL27A1-201ENST00000356083 SNRNP200O75643 2136 aaKnown RBP17.27■□□□□ 0.36
COL27A1-201ENST00000356083 AXIN1O15169 862 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 CAV3P56539 151 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 SLC5A5Q92911 643 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 TMEM68Q96MH6 324 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 UGT2B17O75795 530 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 PPP3R1P63098 170 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 ECH1Q13011 328 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 SPIN3Q5JUX0 258 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 ARNTL2Q8WYA1 636 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 SEC14L3Q9UDX4 400 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 PGAM2P15259 253 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 SPESP1Q6UW49 350 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 LGMNQ99538 433 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 ANKRD6Q9Y2G4 727 aa17.27■□□□□ 0.35
COL27A1-201ENST00000356083 TULP3O75386 442 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 RPLP2P05387 115 aaKnown RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF227Q86WZ6 799 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 DEFB118Q96PH6 123 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 COLEC10Q9Y6Z7 277 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 FKBP6O75344 327 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 SCGB1D2O95969 90 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 FSHRP23945 695 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 NPNTQ6UXI9 565 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 SGMS1Q86VZ5 419 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 STAG3L4Q8TBR4 150 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 ZBTB45Q96K62 511 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 ABHD16BQ9H3Z7 469 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 PIGNO95427 931 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 CSH1P0DML2 217 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 CSH2P0DML3 217 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 CAPGP40121 348 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 RCAN1P53805 252 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 BMT2Q1RMZ1 405 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 WDR59Q6PJI9 974 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 PNO1Q9NRX1 252 aaKnown RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 E5RJQ4 531 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 CCNB1P14635 433 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 CHKAP35790 457 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 OCLNQ16625 522 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 SLC27A1Q6PCB7 646 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 RAVER1Q8IY67 606 aaKnown RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 BRD7Q9NPI1 651 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 ST3GAL5Q9UNP4 418 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 TNPO3Q9Y5L0 923 aaKnown RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 FAM86C2PA6NEL3 165 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 GATBO75879 557 aaKnown RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 PGAM1P18669 254 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 UQCRC1P31930 480 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 TTPAP49638 278 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 LIX1Q8N485 282 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 AP3S1Q92572 193 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 C8orf48Q96LL4 319 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 ATP6AP2A0A1C7CYW4 349 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 ATP6AP2O75787 350 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 MSL3P1P0C860 447 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
COL27A1-201ENST00000356083 BNIP2Q12982 314 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 GTF2IRD2BQ6EKJ0 949 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 FAM131AQ6UXB0 335 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 GTF2IRD2Q86UP8 949 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 NETO2Q8NC67 525 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 REPS2Q8NFH8 660 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 PPCDCQ96CD2 204 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 QRICH2Q9H0J4 1663 aa17.26■□□□□ 0.35
COL27A1-201ENST00000356083 G3V2T6 193 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 NKRFO15226 690 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■■■□□ 16.8
COL27A1-201ENST00000356083 MAGEC1O60732 1142 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF132P52740 706 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 TEAD4Q15561 434 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 LSM12Q3MHD2 195 aaKnown RBP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 HID1Q8IV36 788 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ARMC5Q96C12 935 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 IL12RB2Q99665 862 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 CHIAQ9BZP6 476 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 NRP2O60462 931 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms