RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CCDC25Q86WR0 208 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 METTL23Q86XA0 190 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MINDY1Q8N5J2 469 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SYT2Q8N9I0 419 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MAP7D2Q96T17 732 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CITED2Q99967 270 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CINPQ9BW66 212 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HIPK3Q9H422 1215 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DNAJC18Q9H819 358 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TBC1D17Q9HA65 648 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SLC2A4RGQ9NR83 387 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DDX43Q9NXZ2 648 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 FAM53CQ9NYF3 392 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CNIH4Q9P003 139 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TBK1Q9UHD2 729 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TMCC3Q9ULS5 477 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ADAMTS5Q9UNA0 930 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CMAHPQ9Y471 501 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LIPGQ9Y5X9 500 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 A0A0G2JLL6 359 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 F8W810 466 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 BIN1O00499 593 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CLIC2O15247 247 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 NUAK1O60285 661 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SYNCRIPO60506 623 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MITFO75030 526 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 AVILO75366 819 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 STAM2O75886 525 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 GCNT3O95395 438 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 IL1AP01583 271 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TFP02787 698 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 G6PDP11413 515 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF8P17098 575 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ACADLP28330 430 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SOX2P48431 317 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PNLIPRP2P54317 469 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CSE1LP55060 971 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ITIH3Q06033 890 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 EIF2S3LQ2VIR3 472 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KLHL26Q53HC5 615 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TCP11X2Q5H9J9 407 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PRAMEF19Q5SWL8 479 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF618Q5T7W0 954 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SEPT14Q6ZU15 432 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CATSPER4Q7RTX7 472 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TBC1D26Q86UD7 250 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 FAM124AQ86V42 546 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 WDR5BQ86VZ2 330 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KLBQ86Z14 1044 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PALM2Q8IXS6 379 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SIX6OS1Q8N1H7 587 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LRRC57Q8N9N7 239 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 POMGNT2Q8NAT1 580 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KDM1BQ8NB78 822 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CAMKVQ8NCB2 501 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 GJC3Q8NFK1 279 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 NEK11Q8NG66 645 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HUS1BQ8NHY5 278 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 IL17DQ8TAD2 202 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LPGAT1Q92604 370 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PIGKQ92643 395 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CORO2AQ92828 525 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KIFC3Q9BVG8 833 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TEX12Q9BXU0 123 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 THAP9Q9H5L6 903 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 COPS7BQ9H9Q2 264 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KLC4Q9NSK0 619 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LRIT1Q9P2V4 623 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DKK2Q9UBU2 259 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PPIEQ9UNP9 301 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CLIC4Q9Y696 253 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 IGSF1Q8N6C5 1336 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 COL4A4P53420 1690 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 A0A1W2PRV1 198 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FEZF1A0PJY2 475 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 LNP1A1A4G5 178 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TCAF2A6NFQ2 919 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ENO4A6NNW6 628 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PATE3B3GLJ2 98 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 VCYO14598 125 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 BCAS2O75934 225 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FAM58BPP0C7Q3 252 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 INSRRP14616 1297 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SRD5A1P18405 259 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 MATN1P21941 496 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 GABRA5P31644 462 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RYKP34925 604 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PIGAP37287 484 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CCR3P51677 355 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SLC12A3P55017 1021 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CTSWP56202 376 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CFHR3Q02985 330 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PKP1Q13835 747 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PTK6Q13882 451 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RRS1Q15050 365 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CNGA3Q16281 694 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SGO1Q5FBB7 561 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 METTL24Q5JXM2 366 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 KIAA1755Q5JYT7 1200 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PCSK4Q6UW60 755 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms