RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ANKRD49Q8WVL7 239 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SEPT1Q8WYJ6 367 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 TOP1MTQ969P6 601 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 FBXW5Q969U6 566 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 DUS3LQ96G46 650 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 CENPNQ96H22 339 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 NEDD4LQ96PU5 975 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 GON7Q9BXV9 100 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 C6orf62Q9GZU0 229 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 TLR9Q9NR96 1032 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 CCM2LQ9NUG4 571 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 HES2Q9Y543 173 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 PRR23AA6NEV1 266 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 C16orf96A6NNT2 1141 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 FAM25EA8MYX2 175 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 NDUFA2O43678 99 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 PI15O43692 258 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 GAP43P17677 238 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 OGDHQ02218 1023 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 TAP1Q03518 808 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 MGAT3Q09327 533 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 TRAP1Q12931 704 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SLAMF1Q13291 335 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 TOP3AQ13472 1001 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SEL1L3Q68CR1 1132 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 LINC00299Q6ZSB3 139 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 CDH24Q86UP0 819 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 CNTD1Q8N815 330 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 NSUN6Q8TEA1 469 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 AFG1LQ8WV93 481 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 MSANTD3Q96H12 275 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 C1orf74Q96LT6 269 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SPAG4Q9NPE6 437 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 CACNA2D2Q9NY47 1150 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 FBXO40Q9UH90 709 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 NOSIPQ9Y314 301 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SLC15A5A6NIM6 579 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 YDJCA8MPS7 323 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TOR1AO14656 332 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 ALBP02768 609 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 LTFP02788 710 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 AGXTP21549 392 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 OSBPP22059 807 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 GGT5P36269 586 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 ETV1P50549 477 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 GPR85P60893 370 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 POLR2GP62487 172 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 CD83Q01151 205 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PPIL2Q13356 520 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 MEP1AQ16819 746 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 ATF7IP2Q5U623 682 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TMEM65Q6PI78 240 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 SYCE2Q6PIF2 218 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 CMC1Q7Z7K0 106 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 FEZF2Q8TBJ5 459 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PHOX2BQ99453 314 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 ENTPD7Q9NQZ7 604 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 POLR3BQ9NW08 1133 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TAS2R9Q9NYW1 312 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 CD300AQ9UGN4 299 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TLK1Q9UKI8 766 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 QSER1Q2KHR3 1735 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 CIB4A0PJX0 185 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 FAM159BA6NKW6 160 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 I3L521 148 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 APRTP07741 180 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PROZP22891 400 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 NOVP48745 357 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 CLK2P49760 499 aaKnown RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 LIG4P49917 911 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PICALMQ13492 652 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 NPNTQ6UXI9 565 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PLD6Q8N2A8 252 aaKnown RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 FAR1Q8WVX9 515 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 APBB2Q92870 758 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 RIPOR3Q96MK2 946 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 MCEEQ96PE7 176 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 BDH2Q9BUT1 245 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 IFT22Q9H7X7 185 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 MRPL47Q9HD33 250 aaKnown RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TUFT1Q9NNX1 390 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TBC1D13Q9NVG8 400 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 C14orf119Q9NWQ9 140 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 MRPL39Q9NYK5 338 aaKnown RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 TMPRSS11EQ9UL52 423 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 DIMT1Q9UNQ2 313 aaKnown RBP10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PCDHB3Q9Y5E6 796 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 PSAT1Q9Y617 370 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 V9GYQ6 96 aa10.66□□□□□ -0.7
CAPN3-203ENST00000349748 A0A0B4J203 849 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 SAGE2PA6NJ88 616 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 FAM86B1E9PN63 330 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms