RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RPL14P50914 215 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 KDSRQ06136 332 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ILF2Q12905 390 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PRKAA1Q13131 559 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ACAP2Q15057 778 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PTPRRQ15256 657 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TYSND1Q2T9J0 566 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 AFTPHQ6ULP2 937 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 LSMEM2Q8N112 164 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CPXM2Q8N436 756 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 EFHBQ8N7U6 833 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 FAM13CQ8NE31 585 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 GCNAQ96QF7 691 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SLC46A2Q9BY10 475 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SHCBP1LQ9BZQ2 653 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SMG9Q9H0W8 520 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 POMKQ9H5K3 350 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 MAN1C1Q9NR34 630 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ASAH2Q9NR71 780 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TAGLN3Q9UI15 199 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CLEC4EQ9ULY5 219 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 LEFTY2O00292 366 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 MATN2O00339 956 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 GSC2O15499 205 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 GLUD1P00367 558 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 HOXB8P17481 243 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TFEBP19484 476 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 AOC1P19801 751 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PSMA3P25788 255 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TIAL1Q01085 375 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PFKPQ01813 784 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PPIGQ13427 754 aaKnown RBP eCLIP14.12□□□□□ -0.155e-7■■□□□ 14.4
CDK5RAP1-202ENST00000346416 SLC9B1Q4ZJI4 515 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 RETSATQ6NUM9 610 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TRIM67Q6ZTA4 783 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TEX9Q8N6V9 391 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 BADQ92934 168 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 EMILIN2Q9BXX0 1053 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TM6SF2Q9BZW4 377 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 INTS10Q9NVR2 710 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 HCFC1R1Q9NWW0 138 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 NCKIPSDQ9NZQ3 722 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ZDHHC2Q9UIJ5 367 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PCDHB9Q9Y5E1 797 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 IRAK3Q9Y616 596 aa14.12□□□□□ -0.15
CDK5RAP1-202ENST00000346416 LCHNA4D1U4 455 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 B2RBV5 119 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 HDAC3O15379 428 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SMAD6O43541 496 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 KCNA5P22460 613 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CCR2P41597 374 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 DNAJB13P59910 316 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 MPPE1Q53F39 396 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 MPP7Q5T2T1 576 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PLPP4Q5VZY2 271 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PIWIL4Q7Z3Z4 852 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 MAGEC3Q8TD91 643 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CD248Q9HCU0 757 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 A0A0U1RQS6 177 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 UBA6A0AVT1 1052 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 A8MT66 165 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 FZD6O60353 706 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 NPHS1O60500 1241 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 IPO13O94829 963 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 NCF2P19878 526 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 EPHB1P54762 984 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 FPGSQ05932 587 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 LMAN2Q12907 356 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 RALGPS1Q5JS13 557 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PPM1LQ5SGD2 360 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SEL1L3Q68CR1 1132 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ISCA2Q86U28 154 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 MRPL43Q8N983 215 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 OR6K2Q8NGY2 324 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 FBXO27Q8NI29 283 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ACDQ96AP0 544 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 FAM136AQ96C01 138 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CCDC126Q96EE4 140 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 RAD9AQ99638 391 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 AARSD1Q9BTE6 412 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 ALG9Q9H6U8 611 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CYP4F12Q9HCS2 524 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 BPIFA1Q9NP55 256 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 POLR3BQ9NW08 1133 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 FKBPLQ9UIM3 349 aa14.11□□□□□ -0.15
CDK5RAP1-202ENST00000346416 E9PBE3 544 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SPECC1L-ADORA2AF8WAN1 911 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 STX7O15400 261 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 KLHL41O60662 606 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CTNNB1P35222 781 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 KCNC1P48547 511 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 CDKN1CP49918 316 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SUOXP51687 545 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 HK2P52789 917 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 PLK1P53350 603 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 AP1S1P61966 158 aa14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 SWT1Q5T5J6 900 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP1-202ENST00000346416 TMPRSS6Q8IU80 811 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms