RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GALK1P51570 392 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ZZZ3Q8IYH5 903 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 LPCAT1Q8NF37 534 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 SLC22A4Q9H015 551 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 CDH19Q9H159 772 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ITGA10O75578 1167 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 LIPEQ05469 1076 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 MAMLD1Q13495 774 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 TTLL2Q9BWV7 592 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ZSCAN5CA6NGD5 496 aaPredicted RBP19.39■□□□□ 0.7
HDAC4-201ENST00000345617 RFXANKO14593 260 aa19.39■□□□□ 0.7
HDAC4-201ENST00000345617 MYBL2P10244 700 aa19.39■□□□□ 0.7
HDAC4-201ENST00000345617 RIIAD1A6NNX1 92 aa19.39■□□□□ 0.7
HDAC4-201ENST00000345617 LACTB2Q53H82 288 aaPredicted RBP19.39■□□□□ 0.7
HDAC4-201ENST00000345617 ITGA2BP08514 1039 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 HGFP14210 728 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF410Q86VK4 478 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 ATCAYQ86WG3 371 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 GSC2O15499 205 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 LIASO43766 372 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 C21orf2O43822 256 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 PLK1P53350 603 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 PPP1R15BQ5SWA1 713 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 KLQ9UEF7 1012 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 PPRC1Q5VV67 1664 aaKnown RBP19.39■□□□□ 0.69
HDAC4-201ENST00000345617 FGFR1P11362 822 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 PCDH20Q8N6Y1 951 aaKnown RBP19.39■□□□□ 0.69
HDAC4-201ENST00000345617 SH2D3AQ9BRG2 576 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 ZNRF3Q9ULT6 936 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 MICAL2O94851 1124 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 RPS12P25398 132 aaKnown RBP19.39■□□□□ 0.69
HDAC4-201ENST00000345617 NRG3P56975 720 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF697Q5TEC3 545 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 NIPA1Q7RTP0 329 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 AIREO43918 545 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 PTPN5P54829 565 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 LHFPL3Q86UP9 236 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 TSEN2Q8NCE0 465 aaKnown RBP19.39■□□□□ 0.69
HDAC4-201ENST00000345617 CSGALNACT1Q8TDX6 532 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 DNAJC1Q96KC8 554 aaKnown RBP19.39■□□□□ 0.69
HDAC4-201ENST00000345617 C7orf26Q96N11 449 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 PLLPQ9Y342 182 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 SPEF1Q9Y4P9 236 aa19.39■□□□□ 0.69
HDAC4-201ENST00000345617 GCATO75600 419 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 MT-CO1P00395 513 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 SERPINA3P01011 423 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 FOSL2P15408 326 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 ACOX1Q15067 660 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 BRINP3Q76B58 766 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 GPR180Q86V85 440 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF446Q9NWS9 450 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 SUCOQ9UBS9 1254 aaKnown RBP19.38■□□□□ 0.69
HDAC4-201ENST00000345617 TMEM62Q0P6H9 643 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 ANKRA2Q9H9E1 313 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 CCNCP24863 283 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 FMO4P31512 558 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 OR2T12Q8NG77 320 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 NRP2O60462 931 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 URODP06132 367 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 BUD31P41223 144 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-201ENST00000345617 RORCP51449 518 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 COL6A2P12110 1019 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 ITGA7Q13683 1181 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 FAM171BQ6P995 826 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 SLC4A11Q8NBS3 891 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 ELL3Q9HB65 397 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-201ENST00000345617 PRAMEF33A0A0G2JMD5 474 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 PDCD5O14737 125 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 AZIN1O14977 448 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 PRAMEF10O60809 474 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 LAMTOR4Q0VGL1 99 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 RERGQ96A58 199 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-201ENST00000345617 TAS2R1Q9NYW7 299 aa19.38■□□□□ 0.69
HDAC4-201ENST00000345617 PREX1Q8TCU6 1659 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 LRRC10BA6NIK2 292 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 RBMXL2O75526 392 aaKnown RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 MIPP30301 263 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 BCL2L1Q07817 233 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 SPATS1Q496A3 300 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 CPTPQ5TA50 214 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 ZSWIM2Q8NEG5 633 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 NODALQ96S42 347 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 MROH8Q9H579 483 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 RPLP0P05388 317 aaKnown RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 SAPCD2Q86UD0 394 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF615Q8N8J6 731 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 SLC35C2Q9NQQ7 365 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 KCNIP3Q9Y2W7 256 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 SLC7A2P52569 658 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 CTXN3Q4LDR2 81 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 GPAT3Q53EU6 434 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 ZDHHC20Q5W0Z9 365 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 OR2L5Q8NG80 312 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 AP1S3Q96PC3 154 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 H6PDO95479 791 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 PRH1P02810 166 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 USF2Q15853 346 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 PAMR1Q6UXH9 720 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms