RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 HPCAL1P37235 193 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CDC42P60953 191 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 RFTN1Q14699 578 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 GRIK5Q16478 980 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF423Q2M1K9 1284 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 FCGR1BQ92637 280 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 RDH12Q96NR8 316 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PHF12Q96QT6 1004 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 LRRC3Q9BY71 257 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 MTRRQ9UBK8 725 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 VWA7Q9Y334 891 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 A0A0J9YVX5 310 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF99A8MXY4 864 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 H3BN98 237 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 NKRFO15226 690 aaKnown RBP eCLIP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 BNIP3LO60238 219 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CYBBP04839 570 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 RPLP2P05387 115 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PCNAP12004 261 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 DGKAP23743 735 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ELP6Q0PNE2 266 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 DPYSL2Q16555 572 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 GCNT7Q6ZNI0 430 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 DCP1BQ8IZD4 617 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 MYLPFQ96A32 169 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 NXNL1Q96CM4 212 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 MRPL48Q96GC5 212 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 AGAP2Q99490 1192 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 OSBPL10Q9BXB5 764 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 MARCH7Q9H992 704 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ANKHQ9HCJ1 492 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ZMYM5Q9UJ78 669 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CNOT6Q9ULM6 557 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 OAZ3Q9UMX2 235 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ELOVL7A1L3X0 281 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 BTBD19C9JJ37 291 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 S100A3P33764 101 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 IFNGR2P38484 337 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CCNIQ14094 377 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 MPP2Q14168 576 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 IKBIPQ70UQ0 350 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 KBTBD6Q86V97 674 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PIK3C3Q8NEB9 887 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 SLC4A9Q96Q91 983 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 EHD1Q9H4M9 534 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 RERGLQ9H628 205 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CRLS1Q9UJA2 301 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 SNX6Q9UNH7 406 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 IGKV6D-41A0A0C4DH26 115 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 BCAS2O75934 225 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TSPAN19P0C672 248 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CDH5P33151 784 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 LSM3P62310 102 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TLR1Q15399 786 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TNFAIP8L3Q5GJ75 292 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ABHD15Q6UXT9 468 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 FSTL5Q8N475 847 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PTGR2Q8N8N7 351 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 B3GALNT2Q8NCR0 500 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 GLT1D1Q96MS3 346 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PKP2Q99959 881 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TBCDQ9BTW9 1192 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 SPRTNQ9H040 489 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TLR8Q9NR97 1041 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PPP2R3BQ9Y5P8 575 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ISPDA4D126 451 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 RFXANKO14593 260 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PTX3P26022 381 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ABL2P42684 1182 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ANKS3Q6ZW76 656 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CENPSQ8N2Z9 138 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CARD8Q9Y2G2 431 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 EFCAB9A8MZ26 197 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CNPP09543 421 aaKnown RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ASPAP45381 313 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 SIX1Q15475 284 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CRY1Q16526 586 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 UGCGQ16739 394 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF181Q2M3W8 571 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 C10orf120Q5SQS8 335 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 MPP5Q8N3R9 675 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 OR2T12Q8NG77 320 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 AAASQ9NRG9 546 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 SPASTQ9UBP0 616 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 FAM198AQ9UFP1 575 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 DOLKQ9UPQ8 538 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF37AP17032 561 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-203ENST00000343508 GPRIN3Q6ZVF9 776 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 ADAMTSL2Q86TH1 951 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 KLK14Q9P0G3 267 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 CACNA1SQ13698 1873 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 PIPSLA2A3N6 862 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 H3BMM5 538 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 AIREO43918 545 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 NBNO60934 754 aa4.79□□□□□ -1.64
CSMD3-203ENST00000343508 FGFR1P11362 822 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms